Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37982 | Soybean | cytosol, nucleus, plastid | 4.1 | 81.82 |
| VIT_08s0058g01300.t01 | Wine grape | nucleus | 63.03 | 59.96 |
| KRH65426 | Soybean | nucleus | 60.07 | 58.34 |
| KRH76125 | Soybean | nucleus | 59.39 | 57.49 |
| CDX72340 | Canola | nucleus | 47.1 | 53.84 |
| CDY13468 | Canola | nucleus | 46.99 | 53.64 |
| Bra023968.1-P | Field mustard | nucleus | 46.87 | 53.51 |
| AT4G32010.1 | Thale cress | nucleus | 46.3 | 52.18 |
| GSMUA_Achr5P27930_001 | Banana | nucleus | 33.22 | 50.34 |
| Solyc06g082520.2.1 | Tomato | nucleus | 46.99 | 48.88 |
| GSMUA_Achr8P01750_001 | Banana | nucleus | 46.3 | 47.49 |
| EER99914 | Sorghum | nucleus | 47.78 | 43.89 |
| TraesCS2A01G105600.1 | Wheat | nucleus | 47.21 | 43.73 |
| Os07t0679700-01 | Rice | nucleus | 47.1 | 43.62 |
| TraesCS2D01G105300.1 | Wheat | nucleus | 45.05 | 43.47 |
| Zm00001d022440_P005 | Maize | plastid | 47.21 | 43.09 |
| TraesCS2B01G122500.1 | Wheat | nucleus | 46.53 | 43.05 |
| HORVU2Hr1G017760.4 | Barley | plastid | 46.53 | 39.48 |
| Zm00001d007173_P003 | Maize | mitochondrion, nucleus | 44.82 | 38.93 |
| Solyc10g006830.2.1 | Tomato | cytosol, plastid | 3.98 | 30.43 |
| Solyc02g079020.2.1 | Tomato | nucleus | 35.84 | 30.2 |
| Zm00001d037893_P001 | Maize | mitochondrion | 7.05 | 22.14 |
| Zm00001d045970_P001 | Maize | mitochondrion | 6.37 | 21.71 |
| Zm00001d038148_P001 | Maize | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 7.17 | 21.5 |
| PGSC0003DMT400057590 | Potato | nucleus | 10.69 | 20.35 |
| Solyc02g094460.1.1 | Tomato | nucleus | 6.03 | 19.34 |
| Solyc06g083590.2.1 | Tomato | nucleus | 8.42 | 12.78 |
| Solyc06g083600.1.1 | Tomato | nucleus | 7.85 | 11.13 |
| Zm00001d029836_P001 | Maize | plastid | 0.8 | 7.95 |
Protein Annotations
| MapMan:15.5.5.4 | Gene3D:2.40.330.10 | Gene3D:3.30.40.100 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR011124 | InterPro:IPR015300 |
| UniProt:K4D1U5 | PFAM:PF02362 | PFAM:PF07496 | PFscan:PS50863 | PFscan:PS51050 | PANTHER:PTHR23336 |
| PANTHER:PTHR23336:SF28 | SMART:SM01019 | SUPFAM:SSF101936 | EnsemblPlantsGene:Solyc10g075030.1 | EnsemblPlants:Solyc10g075030.1.1 | UniParc:UPI0002769BE7 |
| InterPro:Znf_CW | SEG:seg | : | : | : | : |
Description
B3 domain-containing transcription repressor VAL2 [Source:Projected from Arabidopsis thaliana (AT4G32010) UniProtKB/Swiss-Prot;Acc:Q5CCK4]
Coordinates
chr10:+:58724644..58735617
Molecular Weight (calculated)
97208.5 Da
IEP (calculated)
6.903
GRAVY (calculated)
-0.631
Length
879 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKICMNGL CGTTSSIEWK KGWPLRSGEF ATLCDKCGNA YEQLLFCDLF HSEDTGWREC ISCGKRLHCG CIASSSLLEL LDSGGINCIS CVRSCQQHAT
101: PNHEKPKAFG TSISNSVGET ASTSLGSQIN GSEPNKREGS DSIDPALLLL HQNDNTNSPI GQIKMEETFH PAGESGSTFS SNLFQASAEF SKNAKLDSYN
201: GYKGVVEIHG STVQTNLSIA LSAPSPNSKL FPTTLDEGDL NKTISSLQQG SRSRNLLPKP PKSASALGPE MNAGIISQIR VARPPVEGRI KNQLLPRYWP
301: RITDQELQQI SGDSNSTIIP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQPEGLPLR IQDVKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA
401: GDTVTFSRMD PEGKLLMGFR KASTVKITQE NRLSAIPKNV FSTEPTSFSA MPENLPLMSG YSGLLQSFKG SRESSVNLSS KHFNSGDFSW YLTEKNGGRN
501: ADGAFSPSMP VSERKRSRNI GSKSKRLLID AHDALELKLS WEELQDMLRP PLSVQPTTVT IEDQEFEEYE QPPVLGKRSI FTVRLSGEQE QWAQCDNCFK
601: WRKLPADYLL PPHWTCQDNI SDHSRSSCSI PDDLTPRELE NLFKMDKDFK KQRSAAGQRI TQAHDSSDLD SQANGISIAG DLGEPGPASV ATTTKHPRHR
701: PGCSCIVCIQ PPSGKGKHNP TCTCNVCMTV KRRFKTLMMR KKKRQSEREA ELGQRNQLMW SSKEETEVDS FSRPVKPEVD PSEKERSGSE TLARGHSSYQ
801: LQKLPEITCL PLETYLRQNG LTSLVSEQQG SSGSQGLPQD TRESDLRVQE DLCLASTAQE QEKDVPKENS EPDQTGKDQ
101: PNHEKPKAFG TSISNSVGET ASTSLGSQIN GSEPNKREGS DSIDPALLLL HQNDNTNSPI GQIKMEETFH PAGESGSTFS SNLFQASAEF SKNAKLDSYN
201: GYKGVVEIHG STVQTNLSIA LSAPSPNSKL FPTTLDEGDL NKTISSLQQG SRSRNLLPKP PKSASALGPE MNAGIISQIR VARPPVEGRI KNQLLPRYWP
301: RITDQELQQI SGDSNSTIIP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQPEGLPLR IQDVKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA
401: GDTVTFSRMD PEGKLLMGFR KASTVKITQE NRLSAIPKNV FSTEPTSFSA MPENLPLMSG YSGLLQSFKG SRESSVNLSS KHFNSGDFSW YLTEKNGGRN
501: ADGAFSPSMP VSERKRSRNI GSKSKRLLID AHDALELKLS WEELQDMLRP PLSVQPTTVT IEDQEFEEYE QPPVLGKRSI FTVRLSGEQE QWAQCDNCFK
601: WRKLPADYLL PPHWTCQDNI SDHSRSSCSI PDDLTPRELE NLFKMDKDFK KQRSAAGQRI TQAHDSSDLD SQANGISIAG DLGEPGPASV ATTTKHPRHR
701: PGCSCIVCIQ PPSGKGKHNP TCTCNVCMTV KRRFKTLMMR KKKRQSEREA ELGQRNQLMW SSKEETEVDS FSRPVKPEVD PSEKERSGSE TLARGHSSYQ
801: LQKLPEITCL PLETYLRQNG LTSLVSEQQG SSGSQGLPQD TRESDLRVQE DLCLASTAQE QEKDVPKENS EPDQTGKDQ
001: MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE VFHAKESGWR ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN
Arabidopsis Description
VAL2B3 domain-containing transcription repressor VAL2 [Source:UniProtKB/Swiss-Prot;Acc:Q5CCK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.