Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G105300.1 | Wheat | nucleus | 93.99 | 97.91 |
| TraesCS2B01G122500.1 | Wheat | nucleus | 97.15 | 97.05 |
| HORVU2Hr1G017760.4 | Barley | plastid | 93.26 | 85.42 |
| Os07t0679700-01 | Rice | nucleus | 81.98 | 81.98 |
| EER99914 | Sorghum | nucleus | 81.35 | 80.67 |
| KRH37982 | Soybean | cytosol, nucleus, plastid | 3.69 | 79.55 |
| Zm00001d022440_P005 | Maize | plastid | 80.51 | 79.34 |
| Zm00001d007173_P003 | Maize | mitochondrion, nucleus | 76.4 | 71.64 |
| Zm00001d037893_P001 | Maize | mitochondrion | 20.23 | 68.57 |
| Zm00001d045970_P001 | Maize | mitochondrion | 18.34 | 67.44 |
| Zm00001d029836_P001 | Maize | plastid | 6.11 | 65.91 |
| GSMUA_Achr5P27930_001 | Banana | nucleus | 38.99 | 63.79 |
| Zm00001d038148_P001 | Maize | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 19.18 | 62.12 |
| GSMUA_Achr8P01750_001 | Banana | nucleus | 52.27 | 57.88 |
| VIT_08s0058g01300.t01 | Wine grape | nucleus | 50.37 | 51.73 |
| CDY13468 | Canola | nucleus | 40.99 | 50.52 |
| CDX72340 | Canola | nucleus | 40.89 | 50.46 |
| Bra023968.1-P | Field mustard | nucleus | 40.89 | 50.39 |
| KRH65426 | Soybean | nucleus | 46.89 | 49.17 |
| AT4G32010.1 | Thale cress | nucleus | 40.15 | 48.85 |
| KRH76125 | Soybean | nucleus | 46.26 | 48.35 |
| Solyc10g075030.1.1 | Tomato | nucleus | 43.73 | 47.21 |
| Solyc06g082520.2.1 | Tomato | nucleus | 41.73 | 46.86 |
| VIT_06s0004g08100.t01 | Wine grape | nucleus | 42.89 | 46.84 |
| CDX97828 | Canola | nucleus | 37.62 | 46.79 |
| CDY02066 | Canola | nucleus | 38.57 | 46.68 |
| Bra021635.1-P | Field mustard | nucleus | 37.83 | 46.38 |
| CDY10738 | Canola | nucleus | 38.25 | 46.12 |
| CDX84832 | Canola | nucleus | 38.04 | 45.99 |
| Bra018313.1-P | Field mustard | nucleus | 38.25 | 45.95 |
| Bra022801.1-P | Field mustard | nucleus | 37.83 | 45.85 |
| CDY29672 | Canola | nucleus | 37.83 | 45.56 |
| CDY23997 | Canola | nucleus | 37.93 | 45.4 |
| AT2G30470.1 | Thale cress | nucleus | 37.2 | 44.68 |
| KRH30646 | Soybean | nucleus | 42.26 | 44.02 |
| KRH72829 | Soybean | nucleus | 32.77 | 43.31 |
| KRG98129 | Soybean | nucleus | 42.26 | 42.89 |
| KRH17186 | Soybean | nucleus | 32.03 | 41.99 |
| TraesCS2A01G204300.1 | Wheat | plastid | 34.67 | 34.13 |
| PGSC0003DMT400057590 | Potato | nucleus | 11.28 | 23.16 |
| TraesCS7A01G329600.1 | Wheat | nucleus | 6.22 | 17.1 |
| TraesCS3A01G249100.2 | Wheat | nucleus | 6.11 | 14.95 |
| TraesCS2A01G554300.1 | Wheat | nucleus | 6.53 | 13.19 |
| TraesCS3A01G417300.1 | Wheat | nucleus | 8.11 | 11.13 |
Protein Annotations
| MapMan:15.5.5.4 | Gene3D:2.40.330.10 | Gene3D:3.30.40.100 | InterPro:B3_DNA-bd | ncoils:Coil | InterPro:DNA-bd_pseudobarrel_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR003340 |
| InterPro:IPR011124 | InterPro:IPR015300 | PFAM:PF02362 | PFAM:PF07496 | PFscan:PS50863 | PFscan:PS51050 |
| PANTHER:PTHR23336 | PANTHER:PTHR23336:SF29 | SMART:SM01019 | SUPFAM:SSF101936 | EnsemblPlantsGene:TraesCS2A01G105600 | EnsemblPlants:TraesCS2A01G105600.1 |
| InterPro:Znf_CW | TIGR:cd10017 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:+:58012403..58019026
Molecular Weight (calculated)
104478.0 Da
IEP (calculated)
6.734
GRAVY (calculated)
-0.538
Length
949 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGMAAAAAR CMNAACGAPA PGVGEWRKGW PLRSGGFAVL CDKCGLAFEQ LVFCDIFHQK ESGWRDCSFC GKRLHCGCVA SKNSFDLLDS GGVQCVNCMK
101: NPGPQPVSCQ VAPKLFLPPP NNQRLFGKSD ELLPGRPLES PSLMLDSRSD DIAIITKSNH PFMVKNLEIG QSSNILRQKE IENGARQIKW EQPTLSIGDM
201: GRMPFLIRPQ SALESPQSQC TRRDDNRDPT ADSTTSESIS EAGLSMSLGI ANNGNKMEAT STMERPMVSP TTPFSEGREL ATTLSPFQHA QRARHFLTRP
301: PRVAEGAAFD PMRDGFPHLR VARPPAEGRG RNQLLPRYWP RITDQELQQI SGDSNSTIVP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQPEGRPLT
401: IQDAKGKEWH FQFRFWPNNN SRMYVLEGVT PCIQSLQLQA GDTVTFSRIE PGGKLVMGFR KATNTVSLPD SQISAIATGS LLGDSFFSNT NENLSIVSGY
501: SGFLQSMKGA ADLQPSSLFD HHANSADGDV SWLKADRFGG RPDEGSFQFL HKRSRSIGSK SRRLLMDNEE ALELKLSWEE AQELLRPAPS AKPTVVMIED
601: YEFEEYDEPP VFAKRSIFTS RSTGEQDQWI QCDDCSKWRR LPLNVIIASK WRCADNTWDP KSCSCSAPEE LAHKELQNIL QQYEEIRRRK SNYFLKQSIP
701: EMDASSLDAL ATAAVFGEVG NQGAASVATT TKHPRHRPGC TCIVCIQPPS GKGPKHNPAC TCNVCMTVRR RFKTLMMRKK QRQSEREEAE ASKRIAWVGR
801: DEPEGSNLSR SPQTVDTARD CDVIMFDKAG ANKGHIDLNF HPASREEEQQ HGGQPRVSMV SLLEVANRPL ESYMKQNGLV SLAAEQGSSS GTATVPSQPA
901: PMESEERPSD EGRAVAVEQE REPVDNMSVD EAACENQGNA ASASDIAAT
101: NPGPQPVSCQ VAPKLFLPPP NNQRLFGKSD ELLPGRPLES PSLMLDSRSD DIAIITKSNH PFMVKNLEIG QSSNILRQKE IENGARQIKW EQPTLSIGDM
201: GRMPFLIRPQ SALESPQSQC TRRDDNRDPT ADSTTSESIS EAGLSMSLGI ANNGNKMEAT STMERPMVSP TTPFSEGREL ATTLSPFQHA QRARHFLTRP
301: PRVAEGAAFD PMRDGFPHLR VARPPAEGRG RNQLLPRYWP RITDQELQQI SGDSNSTIVP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQPEGRPLT
401: IQDAKGKEWH FQFRFWPNNN SRMYVLEGVT PCIQSLQLQA GDTVTFSRIE PGGKLVMGFR KATNTVSLPD SQISAIATGS LLGDSFFSNT NENLSIVSGY
501: SGFLQSMKGA ADLQPSSLFD HHANSADGDV SWLKADRFGG RPDEGSFQFL HKRSRSIGSK SRRLLMDNEE ALELKLSWEE AQELLRPAPS AKPTVVMIED
601: YEFEEYDEPP VFAKRSIFTS RSTGEQDQWI QCDDCSKWRR LPLNVIIASK WRCADNTWDP KSCSCSAPEE LAHKELQNIL QQYEEIRRRK SNYFLKQSIP
701: EMDASSLDAL ATAAVFGEVG NQGAASVATT TKHPRHRPGC TCIVCIQPPS GKGPKHNPAC TCNVCMTVRR RFKTLMMRKK QRQSEREEAE ASKRIAWVGR
801: DEPEGSNLSR SPQTVDTARD CDVIMFDKAG ANKGHIDLNF HPASREEEQQ HGGQPRVSMV SLLEVANRPL ESYMKQNGLV SLAAEQGSSS GTATVPSQPA
901: PMESEERPSD EGRAVAVEQE REPVDNMSVD EAACENQGNA ASASDIAAT
001: MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE VFHAKESGWR ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN
Arabidopsis Description
VAL2B3 domain-containing transcription repressor VAL2 [Source:UniProtKB/Swiss-Prot;Acc:Q5CCK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.