Factsheet for Os07t0679700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
nucleus 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G105300.1	Wheat	nucleus	78.82	82.11
TraesCS2A01G105600.1	Wheat	nucleus	81.98	81.98
TraesCS2B01G122500.1	Wheat	nucleus	81.77	81.68
EER99914	Sorghum	nucleus	82.09	81.4
Zm00001d022440_P005	Maize	plastid	81.98	80.79
KRH37982	Soybean	cytosol, nucleus, plastid	3.69	79.55
Zm00001d007173_P003	Maize	mitochondrion, nucleus	78.29	73.42
HORVU2Hr1G017760.4	Barley	plastid	80.08	73.36
Zm00001d037893_P001	Maize	mitochondrion	19.28	65.36
Zm00001d045970_P001	Maize	mitochondrion	17.39	63.95
GSMUA_Achr5P27930_001	Banana	nucleus	38.99	63.79
GSMUA_Achr8P01750_001	Banana	nucleus	53.64	59.39
Zm00001d029836_P001	Maize	plastid	5.48	59.09
Zm00001d038148_P001	Maize	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.23	59.04
VIT_08s0058g01300.t01	Wine grape	nucleus	50.05	51.41
CDX72340	Canola	nucleus	40.46	49.94
CDY13468	Canola	nucleus	40.25	49.61
Bra023968.1-P	Field mustard	nucleus	40.15	49.48
KRH65426	Soybean	nucleus	46.68	48.95
AT4G32010.1	Thale cress	nucleus	39.52	48.08
KRH76125	Soybean	nucleus	45.94	48.02
VIT_06s0004g08100.t01	Wine grape	nucleus	43.73	47.76
Solyc06g082520.2.1	Tomato	nucleus	42.36	47.57
CDY02066	Canola	nucleus	39.09	47.32
Solyc10g075030.1.1	Tomato	nucleus	43.62	47.1
CDX97828	Canola	nucleus	37.72	46.92
CDY10738	Canola	nucleus	38.67	46.63
Bra021635.1-P	Field mustard	nucleus	37.83	46.38
Bra018313.1-P	Field mustard	nucleus	38.57	46.33
CDX84832	Canola	nucleus	37.83	45.73
Bra022801.1-P	Field mustard	nucleus	37.72	45.72
CDY29672	Canola	nucleus	37.83	45.56
AT2G30470.1	Thale cress	nucleus	37.41	44.94
CDY23997	Canola	nucleus	37.41	44.77
KRH30646	Soybean	nucleus	42.57	44.35
KRH72829	Soybean	nucleus	33.51	44.29
KRG98129	Soybean	nucleus	42.47	43.1
KRH17186	Soybean	nucleus	32.67	42.82
Os07t0563300-01	Rice	nucleus	34.77	34.55
PGSC0003DMT400057590	Potato	nucleus	11.59	23.81
Os01t0713600-01	Rice	plastid	6.11	20.07
Os08t0101000-01	Rice	nucleus	5.8	15.19
Os04t0676650-00	Rice	nucleus	6.95	15.07
Os04t0676600-01	Rice	nucleus	6.43	14.09
Os01t0911700-02	Rice	nucleus	8.22	10.73

Protein Annotations

MapMan:15.5.5.4	Gene3D:2.40.330.10	Gene3D:3.30.40.100	EntrezGene:4344293	EMBL:AK101356	InterPro:B3_DNA-bd
ProteinID:BAC84102.1	ProteinID:BAF22556.1	ProteinID:BAT03230.1	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009058	GO:GO:0009987	GO:GO:0046872	InterPro:IPR003340	InterPro:IPR011124	InterPro:IPR015300
EnsemblPlantsGene:Os07g0679700	EnsemblPlants:Os07t0679700-01	PFAM:PF02362	PFAM:PF07496	PFscan:PS50863	PFscan:PS51050
PANTHER:PTHR23336	PANTHER:PTHR23336:SF29	UniProt:Q6Z3U3	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI00001BF584
RefSeq:XP_015646777.1	InterPro:Znf_CW	SEG:seg	:	:	:

Description

VP1/ABI3-LIKE 2Transcriptional factor B3 family protein. (Os07t0679700-01)

Coordinates

chr7:-:28786471..28793002

Molecular Weight (calculated)

104076.0 Da

IEP (calculated)

6.904

GRAVY (calculated)

-0.490

Length

949 amino acids

Sequence
(BLAST)

001: MAGMAAAAAA LVAAKRCMNA ACGAPAPSPA GGEWRKGWPL RSGGFAVLCD KCGLAYEQLV FCDIFHQKES GWRDCSFCGK RLHCGCIASK NSFDLLDSGG
101: VQCVTCIKNS AVQSVPSPVV PKLFSSQNNQ RLFGKSDDLL SGRPLETSSL MVDARNDDLT IIAKNNLPFM VKNVEAGQSS NILRQKELEN GARQIKWELP
201: TLSIGDMGRI PFLTRSQSAL ESRRDENKDP TTESTTSESL SEACLNMSLG IASNGNKLEA TSTVERPMLS PTTGFPEGRE LTTALSPFQH AQRARHFLTR
301: PPRVGEGAVF DPTKDMLPHL RVARPPAEGR GRNQLLPRYW PRITDQELQQ ISGDSNSTIV PLFEKVLSAS DAGRIGRLVL PKACAEAYFP PISQPEGRPL
401: TIQDAKGKEW HFQFRFWPNN NSRMYVLEGV TPCIQSLQLQ AGDTVTFSRI EPGGKLVMGF RKATNTVSLP DSQISAIANG SILGDTLFSS TNENLAIVSG
501: YSGFLQSIKG AADLHTSSIY DHHVNSADGD VSWLKTDKFG SRPDEGSLQF LKRGRNIGSK SRRLSMDAEE AWELKLYWDE VQELLRPAPT AKPTVVMIED
601: YEIEEYDEPP VFAKRSIFTI RSTGEQDQWI QCDDCSKWRR LPLNVIVASK WTCADNTIDS KSCSCSAPEE LTPKELHIVL QQYEDMRRRR NSFGFKQNIP
701: EMDAVSLDAF ATAAVYGDVG NQGSPSVATT TKHPRHRPGC TCIVCIQPPS GKGPKHNPAC TCNVCMTVRR RFKTLMMRKK QRQSEREEAE ASKKIAWMNR
801: DEPEGSSLSR SPQTVDTTRD GDVTMFDKVD INKGHIDLNF HPTAVRDEER HGGQPRVSMV SLLEVANRPL ENYMKQNGLT SLAGEQGSSS TCTGAATVPQ
901: PALVESEERT SNNDGGRVAT AEQPESMAVD EAGDNQPDKA AGDSAAALA

Best Arabidopsis Sequence Match ( AT4G32010.2 )
(BLAST)

001: MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE VFHAKESGWR ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI
101: SMNVSHESNG KDFPSFASAE HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI SLGPTLMTSP FHDAAVDDRS
201: KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH VARPPPEGRG KTQLLPRYWP RITDQELLQL SGHSNSKIIP LFEKVLSASD AGRIGRLVLP
301: KACAEAYFPP ISLPEGLPLK IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR KATNSTATQM FKGSSEPNLN
401: MFSNSLNPGC GDINWSKLEK SEDMAKDNLF LQSSLTSARK RVRNIGTKSK RLLIDSVDVL ELKITWEEAQ ELLRPPQSTK PSIFTLENQD FEEYDEPPVF
501: GKRTLFVSRQ TGEQEQWVQC DACGKWRQLP VDILLPPKWS CSDNLLDPGR SSCSAPDELS PREQDTLVRQ SKEFKRRRLA SSNEKLNQSQ DASALNSLGN
601: AGITTTGEQG EITVAATTKH PRHRAGCSCI VCSQPPSGKG KHKPSCTCTV CEAVKRRFRT LMLRKRNKGE AGQASQQAQS QSECRDETEV ESIPAVELAA
701: GENIDLNSDP GASRVSMMRL LQAAAFPLEA YLKQKAISNT AGEQQSSDMV STEHGSSSAA QETEKDTTNG AHDPVN

Arabidopsis Description

VAL2B3 domain-containing transcription repressor VAL2 [Source:UniProtKB/Swiss-Prot;Acc:Q5CCK4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.