Factsheet for Zm00001d021790_P010

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006597_P003	Maize	plastid	92.24	92.44
KXG36480	Sorghum	nucleus	91.31	91.22
Os07t0563300-01	Rice	nucleus	71.87	72.77
TraesCS2A01G204300.1	Wheat	plastid	67.74	67.95
TraesCS2D01G211600.2	Wheat	plastid	67.63	67.84
TraesCS2B01G231800.1	Wheat	plastid	66.91	67.4
HORVU2Hr1G040400.1	Barley	nucleus	28.44	65.17
HORVU2Hr1G040410.4	Barley	nucleus, plastid	65.77	65.1
GSMUA_Achr4P23790_001	Banana	nucleus	49.95	54.33
GSMUA_Achr8P03800_001	Banana	nucleus	45.81	54.22
GSMUA_Achr7P00120_001	Banana	nucleus, plastid	49.33	53.54
KRH21568	Soybean	nucleus	43.85	48.24
KRH10760	Soybean	nucleus	43.43	47.84
VIT_00s0181g00260.t01	Wine grape	nucleus	28.34	47.65
Bra013535.1-P	Field mustard	nucleus	26.37	36.48
Solyc02g079020.2.1	Tomato	nucleus	38.57	35.76
CDX82834	Canola	nucleus	26.68	35.68
CDX79071	Canola	nucleus	26.58	35.6
AT4G21550.1	Thale cress	nucleus, plastid	25.54	34.55
Zm00001d022440_P005	Maize	plastid	33.61	33.75
Zm00001d007173_P003	Maize	mitochondrion, nucleus	31.13	29.74
PGSC0003DMT400057590	Potato	nucleus	12.72	26.62
Zm00001d012162_P002	Maize	mitochondrion	3.83	20.9
Zm00001d037893_P001	Maize	mitochondrion	4.86	16.79
Zm00001d011712_P001	Maize	mitochondrion	6.72	16.58
Zm00001d038148_P001	Maize	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	4.76	15.7
Zm00001d045970_P001	Maize	mitochondrion	4.14	15.5
Zm00001d034965_P002	Maize	nucleus	5.69	14.78
Zm00001d052750_P001	Maize	nucleus	5.58	14.63
Zm00001d001838_P001	Maize	nucleus	6.31	13.9
Zm00001d042396_P003	Maize	nucleus	8.17	11.43
Zm00001d029836_P001	Maize	plastid	0.62	6.82

Protein Annotations

EntrezGene:100279769	MapMan:15.5.5.4	Gene3D:2.40.330.10	Gene3D:3.30.40.100	UniProt:A0A1D6IFN3	InterPro:B3_DNA-bd
InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340
InterPro:IPR011124	InterPro:IPR015300	ProteinID:ONM58466.1	PFAM:PF02362	PFAM:PF07496	PFscan:PS50863
PFscan:PS51050	PANTHER:PTHR23336	PANTHER:PTHR23336:SF10	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI0004DEC133
EnsemblPlantsGene:Zm00001d021790	EnsemblPlants:Zm00001d021790_P010	EnsemblPlants:Zm00001d021790_T010	InterPro:Znf_CW	SEG:seg	:

Description

ABI3-VP1-transcription factor 22B3 domain-containing transcription factor VAL3

Coordinates

chr7:+:163070128..163078254

Molecular Weight (calculated)

106441.0 Da

IEP (calculated)

8.415

GRAVY (calculated)

-0.804

Length

967 amino acids

Sequence
(BLAST)

001: MSSPGPQQAP PAQPPPPQAA APPTAAPATV SATSISVQLP PIQPKPPPQP GPTSGPQPPT PAQLLNLGPQ PPLYRGPICW NSYCKDPDPN SFGRRGWKVR
101: SGPPYSVYAD LCGRCYSQFE QGIYCETFHS EEGGWRNCES CGRRVHCGCI VSIHKYQLRD AGGVDCAKCA RSTRAAMAPP SPVWTNPIHS SQNVSDRKDI
201: TVKSWRPPAG QISSQWRQTN LWSVSSIQSD LQQRLAFEFD RPSGSEKLLP GRTFIHSQER KFDDMHDRPA TPAGMNHIMR ERDPNGHGQT TNMDPAYSYT
301: LYHRDGSHPN NLHDSNHHCG ENDSLSSRKV AMPEASTSVD AGFKLDSHHT SNLKDDPPSL SVGLASNFAP QNGPKDHIRI APTQQQSQMT SSSLQKQFYS
401: HAVTGYNEFQ AQMRNGRPRM DSKARSQLLP RYWPRITDQE LQHLSSEYPT HSTYVNNSNS VITPLFEKML SASDAGRIGR LVLPKKCAET YFPPISQPEG
501: LPLKVQDASG KEWIFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRIDPEGKLI MGFRKATNNS FEQEQATKPA NGALATSEAN GKVSAPDSSP
601: NAAVSRQNKL NTETKSSSPV EQATALKMDK DGLTQKEGPG TGSSSPGSVK RKTTILGQKN KRLRMDNEES MELKITWEEA QELLRPPPKA PSIVIVDGHE
701: FEEYEEPPVL GRKTYFVADK SGSNHQWAQC EDCSKWRKLP IDALLPSKWT CSDNKWDPER CSCESAQEIS IEELAEFIPI KPAKKPKLKI ESDAIDASDG
801: LDTLANLAIL GEGEALPSQP TTKHPRHRPG CSCIVCIQPP SGKGPKHKQT CTCNVCMTVR RRFRTLMLRR EKKATKDLSR KKETGQSSEK ATQQAVSGPP
901: GANATATRSA QKADGNTDGP EDMAVDHKVT TSSPVKNHID LNIQPERDDE QSPKSGAAGL LSRDNAT

Best Arabidopsis Sequence Match ( AT2G30470.1 )
(BLAST)

001: MFEVKMGSKM CMNASCGTTS TVEWKKGWPL RSGLLADLCY RCGSAYESSL FCEQFHKDQS GWRECYLCSK RLHCGCIASK VTIELMDYGG VGCSTCACCH
101: QLNLNTRGEN PGVFSRLPMK TLADRQHVNG ESGGRNEGDL FSQPLVMGGD KREEFMPHRG FGKLMSPEST TTGHRLDAAG EMHESSPLQP SLNMGLAVNP
201: FSPSFATEAV EGMKHISPSQ SNMVHCSASN ILQKPSRPAI STPPVASKSA QARIGRPPVE GRGRGHLLPR YWPKYTDKEV QQISGNLNLN IVPLFEKTLS
301: ASDAGRIGRL VLPKACAEAY FPPISQSEGI PLKIQDVRGR EWTFQFRYWP NNNSRMYVLE GVTPCIQSMM LQAGDTVTFS RVDPGGKLIM GSRKAANAGD
401: MQGCGLTNGT STEDTSSSGV TENPPSINGS SCISLIPKEL NGMPENLNSE TNGGRIGDDP TRVKEKKRTR TIGAKNKRLL LHSEESMELR LTWEEAQDLL
501: RPSPSVKPTI VVIEEQEIEE YDEPPVFGKR TIVTTKPSGE QERWATCDDC SKWRRLPVDA LLSFKWTCID NVWDVSRCSC SAPEESLKEL ENVLKVGREH
601: KKRRTGESQA AKSQQEPCGL DALASAAVLG DTIGEPEVAT TTRHPRHRAG CSCIVCIQPP SGKGRHKPTC GCTVCSTVKR RFKTLMMRRK KKQLERDVTA
701: AEDKKKKDME LAESDKSKEE KEVNTARIDL NSDPYNKEDV EAVAVEKEES RKRAIGQCSG VVAQDASDVL GVTELEGEGK NVREEPRVSS

Arabidopsis Description

VAL1B3 domain-containing transcription repressor VAL1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4L5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.