Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79071 | Canola | nucleus | 99.86 | 96.68 |
| AT4G21550.1 | Thale cress | nucleus, plastid | 62.37 | 60.98 |
| VIT_00s0181g00260.t01 | Wine grape | nucleus | 30.33 | 36.87 |
| KRH21568 | Soybean | nucleus | 40.92 | 32.54 |
| KRH10760 | Soybean | nucleus | 40.77 | 32.46 |
| GSMUA_Achr8P03800_001 | Banana | nucleus | 36.77 | 31.46 |
| GSMUA_Achr4P23790_001 | Banana | nucleus | 37.34 | 29.36 |
| GSMUA_Achr7P00120_001 | Banana | nucleus, plastid | 37.2 | 29.18 |
| Bra023968.1-P | Field mustard | nucleus | 32.05 | 29.09 |
| Bra018313.1-P | Field mustard | nucleus | 32.05 | 28.35 |
| Bra021635.1-P | Field mustard | nucleus | 31.04 | 28.04 |
| Bra022801.1-P | Field mustard | nucleus | 31.04 | 27.71 |
| Os07t0563300-01 | Rice | nucleus | 37.63 | 27.54 |
| Zm00001d006597_P003 | Maize | plastid | 36.77 | 26.63 |
| KXG36480 | Sorghum | nucleus | 36.62 | 26.45 |
| Zm00001d021790_P010 | Maize | nucleus | 36.48 | 26.37 |
| HORVU2Hr1G040400.1 | Barley | nucleus | 15.88 | 26.3 |
| TraesCS2A01G204300.1 | Wheat | plastid | 36.05 | 26.14 |
| TraesCS2B01G231800.1 | Wheat | plastid | 35.77 | 26.04 |
| TraesCS2D01G211600.2 | Wheat | plastid | 35.91 | 26.04 |
| HORVU2Hr1G040410.4 | Barley | nucleus, plastid | 35.91 | 25.69 |
| Solyc02g079020.2.1 | Tomato | nucleus | 37.48 | 25.12 |
| Bra032953.1-P | Field mustard | nucleus | 8.15 | 18.51 |
| Bra025229.1-P | Field mustard | nucleus | 5.87 | 15.07 |
| Bra030087.1-P | Field mustard | nucleus | 6.58 | 13.37 |
| Bra032890.1-P | Field mustard | nucleus | 6.58 | 12.99 |
| PGSC0003DMT400057590 | Potato | nucleus | 8.3 | 12.55 |
| Bra013248.1-P | Field mustard | nucleus | 10.3 | 10.04 |
Protein Annotations
| MapMan:15.5.5.4 | Gene3D:2.40.330.10 | InterPro:B3_DNA-bd | EnsemblPlantsGene:Bra013535 | EnsemblPlants:Bra013535.1 | EnsemblPlants:Bra013535.1-P |
| InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0048366 |
| InterPro:IPR003340 | InterPro:IPR015300 | UniProt:M4DAM5 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR23336 |
| PANTHER:PTHR23336:SF10 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0002546FA0 | SEG:seg | : |
Description
AT4G21550 (E=4e-155) VAL3 | VAL3 (VP1/ABI3-LIKE 3); transcription factor
Coordinates
chrA01:+:6179553..6185025
Molecular Weight (calculated)
78085.6 Da
IEP (calculated)
8.146
GRAVY (calculated)
-0.767
Length
699 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPSSYSARF CFNRECPDFN RECYRPGWRL RNGDFADLCN RCATAYEQGR FCDIFHQRAS GWRCCESCGK RIHCGCVVSA PAFTLLDAGG IECLTCARKK
101: VSVSPIADKF QDLSIDWNSS TRSYRPPNLS GPSILQSDLH NRGDCYEFNQ PTSKDKATAY STEKHRGMND LMGRLMSVNS NNHTNSILYN QKAGPNCKVP
201: TCPNVNAYPP LISLKEGPLG AQRAFPVTTP VETNGHLGLG GRYLWHKDNS SPLSHLHNDV NRGADSPLES KNWNFGIHLD TPGKYQVVPR YSPKIPYKNQ
301: VLQNLSNESV SVVTPLFEKI LSVSDAGRVG RMVLPKKCAE AFLPQISQTD GVPLTVHDST GKEWTFQFRF WVNNNSRMYF LEGITPCIQS MQLQAGDTVI
401: FSRVDPEKKL IMGFRKASVA QSSVQETELN NNRESCTNGD AEPIDIHPPN GKKKSSMTTT RSKRQKVEKG ELSEVKLTWE EAQGFILPPP NLTPSIITIE
501: GIEFEEYEDA PIIGKPNTGF GSTCSANGRL LAEQDDEEAK DEAEGLLMSP KSSSKHPRHR NGCTCIVCLQ SPSGSSPKHG RRCSCTVCDT VRRRRETLLQ
601: RKKKQQQIEV ENKTHKELES PNSDEERHQS ANNSGTTSKD HEPSKAQIDL NFQPEKDEES PPPRSKTTTK DKSLHHDEAS FKPPRSSSSA HNKLHVESF
101: VSVSPIADKF QDLSIDWNSS TRSYRPPNLS GPSILQSDLH NRGDCYEFNQ PTSKDKATAY STEKHRGMND LMGRLMSVNS NNHTNSILYN QKAGPNCKVP
201: TCPNVNAYPP LISLKEGPLG AQRAFPVTTP VETNGHLGLG GRYLWHKDNS SPLSHLHNDV NRGADSPLES KNWNFGIHLD TPGKYQVVPR YSPKIPYKNQ
301: VLQNLSNESV SVVTPLFEKI LSVSDAGRVG RMVLPKKCAE AFLPQISQTD GVPLTVHDST GKEWTFQFRF WVNNNSRMYF LEGITPCIQS MQLQAGDTVI
401: FSRVDPEKKL IMGFRKASVA QSSVQETELN NNRESCTNGD AEPIDIHPPN GKKKSSMTTT RSKRQKVEKG ELSEVKLTWE EAQGFILPPP NLTPSIITIE
501: GIEFEEYEDA PIIGKPNTGF GSTCSANGRL LAEQDDEEAK DEAEGLLMSP KSSSKHPRHR NGCTCIVCLQ SPSGSSPKHG RRCSCTVCDT VRRRRETLLQ
601: RKKKQQQIEV ENKTHKELES PNSDEERHQS ANNSGTTSKD HEPSKAQIDL NFQPEKDEES PPPRSKTTTK DKSLHHDEAS FKPPRSSSSA HNKLHVESF
001: MLSSSSMSSS SLSARFCFNH ECFEFKLDHC RPGWRLRSGD FVDLCDRCAS AYEQGKFCDV FHQRASGWRC CESCGKRIHC GCIASASAYT LMDAGGIECL
101: ACARKKFALG PNFSPSPSFL FQSPISEKFK DLSINWSSST RSNQISYQPP SCLDPSVLQF DFRNRGGNNE FSQPASKERV TACTMEKKRG MNDMIGKLMS
201: ENSKHYRVSP FPNVNVYHPL ISLKEGPCGT QLAFPVPITT PIEKTGHSRL DGSNLWHTRN SSPLSRLHND LNGGADSPFE SKSRNVMAHL ETPGKYQVVP
301: RFWPKVSYKN QVLQNQSKES ESVVTPLFEK ILSATDTGKR LVLPKKYAEA FLPQLSHTKG VPLTVQDPMG KEWRFQFRFW PSSKGRIYVL EGVTPFIQTL
401: QLQAGDTVIF SRLDPERKLI LGFRKASITQ SSDQADPADM HSPFEVKKSA YITKETPGVE CSSGKKKSSM MITRSKRQKV EKGDDNLLKL TWEEAQGFLL
501: PPPNLTPSRV VIEDYEFEEY EEAPIIGKPT DVAGFRSTCT EVEGLLISPT TTKHPRHRDG CTCIICIQSP SGIGPKHDRC CSCAVCDTNK RRRRSLLLRR
601: EKKQMEKEDN ARKLLEQLNS DNGLHQSANN SENHERHASP LKVQLDLNFK PEKDEESLPG SNKTTKSETL PHDDTVKSSF TSPSSSSAHS QNNKEDEGKL
701: KTTTEIADTT TTSSM
101: ACARKKFALG PNFSPSPSFL FQSPISEKFK DLSINWSSST RSNQISYQPP SCLDPSVLQF DFRNRGGNNE FSQPASKERV TACTMEKKRG MNDMIGKLMS
201: ENSKHYRVSP FPNVNVYHPL ISLKEGPCGT QLAFPVPITT PIEKTGHSRL DGSNLWHTRN SSPLSRLHND LNGGADSPFE SKSRNVMAHL ETPGKYQVVP
301: RFWPKVSYKN QVLQNQSKES ESVVTPLFEK ILSATDTGKR LVLPKKYAEA FLPQLSHTKG VPLTVQDPMG KEWRFQFRFW PSSKGRIYVL EGVTPFIQTL
401: QLQAGDTVIF SRLDPERKLI LGFRKASITQ SSDQADPADM HSPFEVKKSA YITKETPGVE CSSGKKKSSM MITRSKRQKV EKGDDNLLKL TWEEAQGFLL
501: PPPNLTPSRV VIEDYEFEEY EEAPIIGKPT DVAGFRSTCT EVEGLLISPT TTKHPRHRDG CTCIICIQSP SGIGPKHDRC CSCAVCDTNK RRRRSLLLRR
601: EKKQMEKEDN ARKLLEQLNS DNGLHQSANN SENHERHASP LKVQLDLNFK PEKDEESLPG SNKTTKSETL PHDDTVKSSF TSPSSSSAHS QNNKEDEGKL
701: KTTTEIADTT TTSSM
Arabidopsis Description
VAL3VP1/ABI3-like 3 [Source:TAIR;Acc:AT4G21550]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.