Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030087.1-P | Field mustard | nucleus | 98.28 | 99.71 |
| CDX94608 | Canola | nucleus | 97.71 | 97.71 |
| CDY66878 | Canola | nucleus | 77.08 | 74.72 |
| CDY46611 | Canola | nucleus | 75.64 | 73.54 |
| AT1G28300.1 | Thale cress | nucleus | 69.63 | 66.94 |
| GSMUA_Achr8P18070_001 | Banana | nucleus | 19.48 | 32.69 |
| GSMUA_Achr3P32440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 17.77 | 30.54 |
| TraesCS3D01G249100.1 | Wheat | plastid | 21.78 | 25.25 |
| TraesCS3B01G278000.1 | Wheat | plastid | 21.78 | 25.17 |
| Os01t0713600-01 | Rice | plastid | 20.06 | 24.22 |
| CDY13657 | Canola | nucleus | 19.77 | 21.9 |
| CDY34212 | Canola | nucleus | 19.2 | 21.75 |
| CDY28525 | Canola | nucleus | 19.2 | 21.68 |
| CDY53003 | Canola | nucleus | 19.48 | 21.66 |
| KRG89628 | Soybean | plastid | 21.49 | 19.89 |
| TraesCS3A01G249100.2 | Wheat | nucleus | 22.06 | 19.85 |
| HORVU3Hr1G067350.2 | Barley | nucleus | 20.92 | 19.68 |
| KRG89627 | Soybean | nucleus | 20.92 | 19.36 |
| Zm00001d011712_P001 | Maize | mitochondrion | 21.2 | 18.88 |
| KXG33236 | Sorghum | mitochondrion, nucleus | 21.2 | 18.88 |
| CDY15121 | Canola | nucleus | 26.65 | 13.84 |
| CDX93029 | Canola | nucleus | 26.65 | 12.95 |
| CDX84832 | Canola | nucleus | 15.19 | 6.75 |
| CDX79071 | Canola | nucleus | 13.75 | 6.65 |
| CDX82834 | Canola | nucleus | 13.75 | 6.64 |
| CDY13468 | Canola | nucleus | 14.61 | 6.62 |
| CDY10738 | Canola | nucleus | 14.9 | 6.61 |
| CDY23997 | Canola | nucleus | 14.9 | 6.56 |
| CDX97828 | Canola | nucleus | 14.33 | 6.55 |
| CDY02066 | Canola | nucleus | 14.61 | 6.51 |
| CDX72340 | Canola | nucleus | 14.33 | 6.5 |
| CDY29672 | Canola | nucleus | 14.61 | 6.47 |
| CDX68809 | Canola | cytosol | 0.86 | 2.29 |
Protein Annotations
| MapMan:15.5.5.5 | Gene3D:2.40.330.10 | InterPro:B3_DNA-bd | unigene:Bna.10484 | EnsemblPlants:CDY15679 | ProteinID:CDY15679 |
| ProteinID:CDY15679.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:E2GMX5 | UniProt:E2GMX5 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00089892001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF1 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0001E6133B | SEG:seg |
Description
BnaA07g08500DBnaA07g08500D protein [Source:UniProtKB/TrEMBL;Acc:E2GMX5]
Coordinates
chrLK032056:+:412109..415737
Molecular Weight (calculated)
40044.1 Da
IEP (calculated)
6.138
GRAVY (calculated)
-0.723
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNFLPFSSS NANSVQELSM DLNKNRSHFS MAQPQHLLPP YSYVACPALD QTGTMNHQPL HSSDAFPQIP VVQTGGEFGY LVCKPGVRQE RGGFLDPHST
101: KMARINRKKA MLRSRNNSNP NSSSNELVDS RRQVALTMKN NAEIAARKDF YRFSSFDNKK LRVLLVKHLK NSDVGSLGRI VLPKREAEGN LPELSDKEGM
201: VLEMRDVDSV QSWSFKYKYW SNNKSRMYVL ENTGEFVKKN GVLMGDYLTI YEDESKNLYF SIRKHPHKQN DGREDESMEV IEMNFYEDIM FDYIPNDEDD
301: SIAMLLGNLN EHYPYPNDLM DLTVNLDQHQ QATSSSPPAD HMSSNDFLW
101: KMARINRKKA MLRSRNNSNP NSSSNELVDS RRQVALTMKN NAEIAARKDF YRFSSFDNKK LRVLLVKHLK NSDVGSLGRI VLPKREAEGN LPELSDKEGM
201: VLEMRDVDSV QSWSFKYKYW SNNKSRMYVL ENTGEFVKKN GVLMGDYLTI YEDESKNLYF SIRKHPHKQN DGREDESMEV IEMNFYEDIM FDYIPNDEDD
301: SIAMLLGNLN EHYPYPNDLM DLTVNLDQHQ QATSSSPPAD HMSSNDFLW
001: MDNFLPFPSS NANSVQELSM DPNNNRSHFT TVPTYDHHQA QPHHFLPPFS YPVEQMAAVM NPQPVYLSEC YPQIPVTQTG SEFGSLVGNP CLWQERGGFL
101: DPRMTKMARI NRKNAMMRSR NNSSPNSSPS ELVDSKRQLM MLNLKNNVQI SDKKDSYQQS TFDNKKLRVL CEKELKNSDV GSLGRIVLPK RDAEANLPKL
201: SDKEGIVVQM RDVFSMQSWS FKYKFWSNNK SRMYVLENTG EFVKQNGAEI GDFLTIYEDE SKNLYFAMNG NSGKQNEGRE NESRERNHYE EAMLDYIPRD
301: EEEASIAMLI GNLNDHYPIP NDLMDLTTDL QHHQATSSSM PPEDHAYVGS SDDQVSFNDF EWW
101: DPRMTKMARI NRKNAMMRSR NNSSPNSSPS ELVDSKRQLM MLNLKNNVQI SDKKDSYQQS TFDNKKLRVL CEKELKNSDV GSLGRIVLPK RDAEANLPKL
201: SDKEGIVVQM RDVFSMQSWS FKYKFWSNNK SRMYVLENTG EFVKQNGAEI GDFLTIYEDE SKNLYFAMNG NSGKQNEGRE NESRERNHYE EAMLDYIPRD
301: EEEASIAMLI GNLNDHYPIP NDLMDLTTDL QHHQATSSSM PPEDHAYVGS SDDQVSFNDF EWW
Arabidopsis Description
LEC2B3 domain-containing transcription factor LEC2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFR7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.