Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
KRG90996 | nucleus |
KRG91429 | |
KRG99255 | endoplasmic reticulum |
KRG99448 | nucleus |
KRH04529 | nucleus |
KRH04631 | nucleus |
KRH05060 | nucleus |
KRH16044 | nucleus |
KRH28363 | nucleus |
KRH28424 | nucleus |
KRH28480 | nucleus |
KRH35393 | |
KRH35760 | nucleus |
KRH44391 | nucleus |
KRH45568 | nucleus |
KRH45743 | endoplasmic reticulum |
KRH47513 | nucleus |
KRH50258 | nucleus |
KRH52524 | nucleus |
KRH57804 | nucleus |
KRH57973 | nucleus |
KRH61850 | nucleus |
KRH69476 | endoplasmic reticulum |
KRH69654 | nucleus |
KRH71159 | nucleus |
KRH74510 | nucleus |
KRH74675 | endoplasmic reticulum |
KRH76992 | nucleus |
KRH77050 | nucleus |
KRH77118 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH59626 | Soybean | cytosol | 60.61 | 90.32 |
Solyc12g027870.1.1 | Tomato | cytosol | 64.94 | 89.29 |
KRH40974 | Soybean | cytosol, nucleus | 87.01 | 87.2 |
VIT_07s0031g02680.t01 | Wine grape | cytosol | 85.06 | 81.7 |
GSMUA_Achr11P... | Banana | cytosol | 77.92 | 77.25 |
OQU92050 | Sorghum | cytosol | 78.14 | 76.65 |
TraesCS1D01G201600.1 | Wheat | cytosol | 77.92 | 76.6 |
TraesCS1A01G198100.2 | Wheat | cytosol | 77.92 | 76.6 |
GSMUA_Achr5P18030_001 | Banana | cytosol | 77.27 | 76.45 |
HORVU1Hr1G051380.3 | Barley | cytosol | 77.71 | 76.38 |
TraesCS1B01G212800.1 | Wheat | cytosol | 77.71 | 76.38 |
Bra037748.1-P | Field mustard | cytosol | 76.41 | 75.43 |
Os10t0580300-01 | Rice | cytosol, plasma membrane | 77.49 | 75.37 |
CDY60036 | Canola | cytosol | 76.19 | 75.21 |
Zm00001d014438_P001 | Maize | cytosol | 76.62 | 75.16 |
AT5G63610.1 | Thale cress | cytosol | 76.19 | 74.89 |
CDX81189 | Canola | cytosol, nucleus, plastid | 70.13 | 74.48 |
KRH57887 | Soybean | cytosol | 37.88 | 74.15 |
KRH36887 | Soybean | cytosol, nucleus | 28.79 | 45.24 |
KRH11866 | Soybean | cytosol, nucleus | 28.79 | 45.24 |
KRH42252 | Soybean | cytosol | 28.79 | 45.24 |
KRH58370 | Soybean | cytosol | 28.57 | 44.0 |
KRH48128 | Soybean | cytosol | 28.57 | 41.9 |
KRH37522 | Soybean | cytosol | 28.57 | 41.64 |
KRH06014 | Soybean | cytosol | 27.71 | 40.76 |
KRH47306 | Soybean | cytosol, nucleus, plasma membrane | 27.71 | 40.76 |
KRH41782 | Soybean | cytosol, nucleus | 30.95 | 39.39 |
KRH17547 | Soybean | cytosol | 27.71 | 37.98 |
KRH57208 | Soybean | cytosol | 16.88 | 36.79 |
KRH60482 | Soybean | cytosol | 32.03 | 36.19 |
KRH13011 | Soybean | cytosol | 25.11 | 35.26 |
KRH26046 | Soybean | cytosol | 22.08 | 34.58 |
KRH39114 | Soybean | nucleus | 30.52 | 34.31 |
KRH48600 | Soybean | cytosol | 29.22 | 33.67 |
KRH44859 | Soybean | cytosol | 23.81 | 32.93 |
KRH76377 | Soybean | cytosol | 27.49 | 28.22 |
KRH07697 | Soybean | nucleus | 27.49 | 28.16 |
KRH39665 | Soybean | cytosol | 27.71 | 28.13 |
KRH07201 | Soybean | cytosol | 24.46 | 27.16 |
KRH07433 | Soybean | cytosol | 25.32 | 26.9 |
KRH66138 | Soybean | cytosol | 25.11 | 26.67 |
KRH03917 | Soybean | nucleus | 30.3 | 24.48 |
KRH57202 | Soybean | nucleus | 30.3 | 24.31 |
KRH58745 | Soybean | nucleus | 33.55 | 20.78 |
KRH42643 | Soybean | nucleus | 33.33 | 20.67 |
KRH31446 | Soybean | nucleus | 32.68 | 20.35 |
KRG97452 | Soybean | nucleus | 24.89 | 18.37 |
Protein Annotations
Gene3D:1.10.510.10 | EntrezGene:100813433 | MapMan:13.1.1.2.5 | MapMan:15.3.3.4.3 | MapMan:18.4.3.1.5 | Gene3D:3.30.200.20 |
EMBL:ACUP02002733 | EnsemblPlantsGene:GLYMA_04G207900 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
GO:GO:0004674 | GO:GO:0004693 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007049 |
GO:GO:0007346 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016592 |
GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | UniProt:K7KLD7 | EnsemblPlants:KRH63972 | ProteinID:KRH63972 |
ProteinID:KRH63972.1 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 |
PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF92 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 |
SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00023397EF | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:+:48041004..48049336
Molecular Weight (calculated)
51643.3 Da
IEP (calculated)
9.374
GRAVY (calculated)
-0.419
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDDSGSNRS KPEWLQQYDL IGKIGEGTYG LVFLARIKSS TNRGKSIAIK KFKQSKDGDG VSPTAIREIM LLREITHENV VKLVNVHINH MDMSLYLAFD
101: YAEHDLFEII RHHRDKVNQS INQYTVKSLL WQLLNGLNYL HSNWIIHRDL KPSNILVMGE GEEHGVVKIA DFGLARIYQA PLKPLSENGV VVTIWYRAPE
201: LLLGAKHYTS AVDMWAVGCI FAELLTLKPL FQGAEVKATP NPFQLDQLDK IFKVLGHPTL EKWPSLANLP HWQQDSQHIQ GHKYDNASLC SVLQLSPKSP
301: AYDLLSKMLE YDPRKRITAA QALEHEYFKI EPLPGRNALV PCQPGDTFVN YPTRPVDTTT DFEGTANMQP SQPVSSGAAV SGNMPGGHVS NRSVPRPMNV
401: GGMQRIPHQA MQGYNLSSQA GMGAGMNPGG IPMQRGVPQQ QLRRKDQMGM PGYPPQQKSR RI
101: YAEHDLFEII RHHRDKVNQS INQYTVKSLL WQLLNGLNYL HSNWIIHRDL KPSNILVMGE GEEHGVVKIA DFGLARIYQA PLKPLSENGV VVTIWYRAPE
201: LLLGAKHYTS AVDMWAVGCI FAELLTLKPL FQGAEVKATP NPFQLDQLDK IFKVLGHPTL EKWPSLANLP HWQQDSQHIQ GHKYDNASLC SVLQLSPKSP
301: AYDLLSKMLE YDPRKRITAA QALEHEYFKI EPLPGRNALV PCQPGDTFVN YPTRPVDTTT DFEGTANMQP SQPVSSGAAV SGNMPGGHVS NRSVPRPMNV
401: GGMQRIPHQA MQGYNLSSQA GMGAGMNPGG IPMQRGVPQQ QLRRKDQMGM PGYPPQQKSR RI
001: MGDGSSSRSN SSNSTSEKPE WLQQYNLVGK IGEGTYGLVF LARTKTPPKR PIAIKKFKQS KDGDGVSPTA IREIMLLREI SHENVVKLVN VHINFADMSL
101: YLAFDYAEYD LYEIIRHHRD KVGHSLNTYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGDAEEHG IVKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGS KHYTSAVDMW AVGCIFAELL TLKPLFQGAE AKSSQNPFQL DQLDKIFKIL GHPTMDKWPT LVNLPHWQND VQHIQAHKYD SVGLHNVVHL
301: NQKSPAYDLL SKMLEYDPLK RITASQALEH EYFRMDPLPG RNAFVASQPM EKNVNYPTRP VDTNTDFEGT TSINPPQAVA AGNVAGNMAG AHGMGSRSMP
401: RPMVAHNMQR MQQSQGMMAY NFPAQAGLNP SVPLQQQRGM AQPHQQQQLR RKDPGMGMSG YAPPNKSRRL
101: YLAFDYAEYD LYEIIRHHRD KVGHSLNTYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGDAEEHG IVKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGS KHYTSAVDMW AVGCIFAELL TLKPLFQGAE AKSSQNPFQL DQLDKIFKIL GHPTMDKWPT LVNLPHWQND VQHIQAHKYD SVGLHNVVHL
301: NQKSPAYDLL SKMLEYDPLK RITASQALEH EYFRMDPLPG RNAFVASQPM EKNVNYPTRP VDTNTDFEGT TSINPPQAVA AGNVAGNMAG AHGMGSRSMP
401: RPMVAHNMQR MQQSQGMMAY NFPAQAGLNP SVPLQQQRGM AQPHQQQQLR RKDPGMGMSG YAPPNKSRRL
Arabidopsis Description
CDKE-1Cyclin-dependent kinase E-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.