Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76137 | Soybean | plastid | 88.79 | 88.39 |
| KRH65411 | Soybean | cytosol, nucleus, plastid | 88.34 | 87.95 |
| PGSC0003DMT400066949 | Potato | nucleus | 77.13 | 78.18 |
| VIT_15s0021g02680.t01 | Wine grape | plastid | 79.82 | 77.73 |
| Solyc01g090800.2.1 | Tomato | cytosol | 76.23 | 77.27 |
| Bra004888.1-P | Field mustard | mitochondrion, plastid | 73.99 | 74.32 |
| CDX74709 | Canola | mitochondrion, plastid | 73.99 | 74.32 |
| CDY18953 | Canola | mitochondrion, plastid | 73.54 | 73.87 |
| AT2G45080.1 | Thale cress | cytosol | 73.09 | 73.42 |
| Bra000369.1-P | Field mustard | plastid | 72.65 | 72.32 |
| CDX83405 | Canola | mitochondrion, plastid | 72.2 | 71.88 |
| CDX95626 | Canola | mitochondrion, plastid | 72.2 | 71.88 |
| Bra003420.1-P | Field mustard | cytosol | 70.4 | 71.36 |
| AT3G60550.1 | Thale cress | mitochondrion, nucleus, plastid | 73.54 | 71.3 |
| Bra007544.1-P | Field mustard | plastid | 73.54 | 70.39 |
| CDY41156 | Canola | plastid | 73.09 | 69.96 |
| CDX71800 | Canola | plastid | 73.09 | 69.36 |
| CDX67834 | Canola | cytosol | 71.75 | 69.26 |
| CDX98427 | Canola | cytosol | 69.96 | 67.24 |
| GSMUA_Achr4P24630_001 | Banana | nucleus | 60.54 | 58.19 |
| Os04t0552300-01 | Rice | cytosol | 47.09 | 48.39 |
| KRH71916 | Soybean | cytosol | 19.73 | 44.0 |
| Zm00001d002733_P001 | Maize | cytosol | 45.74 | 43.04 |
| TraesCS2A01G413300.1 | Wheat | cytosol | 43.95 | 42.42 |
| EES11236 | Sorghum | cytosol | 44.39 | 42.31 |
| TraesCS2B01G432000.1 | Wheat | cytosol | 43.5 | 41.81 |
| TraesCS2D01G411300.1 | Wheat | cytosol | 43.5 | 41.81 |
| KRH40216 | Soybean | nucleus | 31.39 | 37.23 |
| KRH48888 | Soybean | nucleus | 33.63 | 37.13 |
| KRG96839 | Soybean | nucleus | 28.7 | 36.36 |
| KRH67205 | Soybean | nucleus | 34.98 | 35.94 |
| KRH66451 | Soybean | cytosol | 33.18 | 35.41 |
| KRH26828 | Soybean | cytosol | 36.32 | 34.91 |
| KRH01000 | Soybean | nucleus | 31.84 | 34.63 |
| KRH22528 | Soybean | nucleus | 35.87 | 34.48 |
| KRG95527 | Soybean | nucleus | 34.53 | 31.3 |
| KRH07327 | Soybean | endoplasmic reticulum, extracellular | 20.18 | 29.8 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100791103 | MapMan:13.1.1.1.7 | UniProt:A0A0R0EFF7 | InterPro:Cyclin-like_sf | InterPro:Cyclin_P/U |
| InterPro:Cyclin_PHO80-like | EnsemblPlantsGene:GLYMA_U014600 | GO:GO:0000079 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006464 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0019901 | EnsemblPlants:KRG88936 | ProteinID:KRG88936 | ProteinID:KRG88936.1 | PFAM:PF08613 | PIRSF:PIRSF027110 |
| PANTHER:PTHR15615 | PANTHER:PTHR15615:SF15 | SUPFAM:SSF47954 | UniParc:UPI00054A0864 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chrscaffold_21:-:1802362..1803856
Molecular Weight (calculated)
26010.5 Da
IEP (calculated)
8.859
GRAVY (calculated)
-0.199
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSLIISPR KLRSDLYSYS YQEDHYSTPL VINVLASLIE RSMARTERIV KNGSRSLSKA ISTNIFDCRE ILDMTIQSYL ERIFRYTRAG PSVYVVAYVY
101: IDRFCQNNPG FRINARNVHR LLITTIMLAS KYVEDMNYRN SYFGRVGGLT TDELNKLELE FLFLMDFKLH VNVSVFESYC CHLEREVSIG GGYHIERTLR
201: CAEEIKAKHR EERGYTHIAR VML
101: IDRFCQNNPG FRINARNVHR LLITTIMLAS KYVEDMNYRN SYFGRVGGLT TDELNKLELE FLFLMDFKLH VNVSVFESYC CHLEREVSIG GGYHIERTLR
201: CAEEIKAKHR EERGYTHIAR VML
001: MDSLAISPRK LRSDLYSYSY QDDSNTVPLV ISVLSSLIER TLARNERISR SYGGFGKTRV FDCREIPDMT IQSYLERIFR YTKAGPSVYV VAYVYIDRFC
101: QNNQGFRISL TNVHRLLITT IMIASKYVED MNYKNSYFAK VGGLETEDLN NLELEFLFLM GFKLHVNVSV FESYCCHLER EVSIGGGYQI EKALRCAEEI
201: KSRQIVQDPK HHHHHQFSRI ML
101: QNNQGFRISL TNVHRLLITT IMIASKYVED MNYKNSYFAK VGGLETEDLN NLELEFLFLM GFKLHVNVSV FESYCCHLER EVSIGGGYQI EKALRCAEEI
201: KSRQIVQDPK HHHHHQFSRI ML
Arabidopsis Description
CYCU2-1Cycp3 [Source:UniProtKB/TrEMBL;Acc:A0A178VTM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.