Factsheet for TraesCS2A01G413300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4B01G353600.1
TraesCS4D01G347600.1
TraesCS5A01G521700.1
TraesCS6A01G078200.1
TraesCS6B01G105100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45080.1	TraesCS4B01G353600.1	AT3G48750.1	15197472
AT2G45080.1	TraesCS4D01G347600.1	AT3G48750.1	15197472
AT2G45080.1	TraesCS5A01G521700.1	AT3G48750.1	15197472
AT2G45080.1	TraesCS6A01G078200.1	AT3G48750.1	15197472
AT2G45080.1	TraesCS6B01G105100.1	AT3G48750.1	15197472
AT3G60550.1	TraesCS4B01G353600.1	AT3G48750.1	15197472
AT3G60550.1	TraesCS4D01G347600.1	AT3G48750.1	15197472
AT3G60550.1	TraesCS5A01G521700.1	AT3G48750.1	15197472
AT3G60550.1	TraesCS6A01G078200.1	AT3G48750.1	15197472
AT3G60550.1	TraesCS6B01G105100.1	AT3G48750.1	15197472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G411300.1	Wheat	cytosol	94.81	94.4
TraesCS2B01G432000.1	Wheat	cytosol	94.37	93.97
Os04t0552300-01	Rice	cytosol	76.62	81.57
Zm00001d002733_P001	Maize	cytosol	71.43	69.62
EES11236	Sorghum	cytosol	69.7	68.8
GSMUA_Achr4P24630_001	Banana	nucleus	51.08	50.86
Bra004888.1-P	Field mustard	mitochondrion, plastid	43.72	45.5
CDX74709	Canola	mitochondrion, plastid	43.72	45.5
CDY18953	Canola	mitochondrion, plastid	43.72	45.5
AT2G45080.1	Thale cress	cytosol	42.42	44.14
KRG88936	Soybean	nucleus	42.42	43.95
PGSC0003DMT400066949	Potato	nucleus	41.56	43.64
Bra000369.1-P	Field mustard	plastid	41.99	43.3
CDX95626	Canola	mitochondrion, plastid	41.56	42.86
CDX83405	Canola	mitochondrion, plastid	41.56	42.86
Solyc01g090800.2.1	Tomato	cytosol	40.69	42.73
KRH76137	Soybean	plastid	41.13	42.41
KRH65411	Soybean	cytosol, nucleus, plastid	40.26	41.52
VIT_15s0021g02680.t01	Wine grape	plastid	41.13	41.48
Bra003420.1-P	Field mustard	cytosol	39.39	41.36
AT3G60550.1	Thale cress	mitochondrion, nucleus, plastid	41.13	41.3
Bra007544.1-P	Field mustard	plastid	41.13	40.77
CDY41156	Canola	plastid	41.13	40.77
CDX67834	Canola	cytosol	39.83	39.83
CDX98427	Canola	cytosol	39.83	39.66
CDX71800	Canola	plastid	39.83	39.15
TraesCS6A01G083300.1	Wheat	cytosol, mitochondrion, nucleus, plastid	33.77	34.51
TraesCS6A01G241800.1	Wheat	nucleus	31.6	34.43
TraesCS1A01G217000.1	Wheat	cytosol	33.77	32.1
TraesCS2A01G479100.1	Wheat	cytosol	29.44	27.87
TraesCS2A01G391500.1	Wheat	nucleus	29.44	27.09
TraesCS1A01G249300.1	Wheat	nucleus	26.84	25.94

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.7	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_P/U	InterPro:Cyclin_PHO80-like
GO:GO:0000079	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0007049
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019901	PFAM:PF08613
PIRSF:PIRSF027110	PANTHER:PTHR15615	PANTHER:PTHR15615:SF15	SUPFAM:SSF47954	EnsemblPlantsGene:TraesCS2A01G413300	EnsemblPlants:TraesCS2A01G413300.1
TIGR:cd00043	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:670641484..670642179

Molecular Weight (calculated)

24681.2 Da

IEP (calculated)

8.093

GRAVY (calculated)

-0.055

Length

231 amino acids

Sequence
(BLAST)

001: MASAELGSES DGYGFPCGGD DGATAALSPA VVVSVLASLL ERHIARNERA LAGAHGHAAS GEDARRAAAF DGGTVLDMGM REFLERFSRY AHVSPQVYVV
101: AYAYLDRLRR GGDGAGAVRV VATNAQRLLT AAILVASKFV EDRNYKNSYF AAVGGLGAAE LSSLELDFLF LMRFRLNVSV SVFRSYCRHL EREAGHGGGY
201: QVERCLEKAL LVSSGEARRQ HRQPPAAAAA Q

Best Arabidopsis Sequence Match ( AT2G45080.1 )
(BLAST)

001: MDSLAISPRK LRSDLYSYSY QDDSNTVPLV ISVLSSLIER TLARNERISR SYGGFGKTRV FDCREIPDMT IQSYLERIFR YTKAGPSVYV VAYVYIDRFC
101: QNNQGFRISL TNVHRLLITT IMIASKYVED MNYKNSYFAK VGGLETEDLN NLELEFLFLM GFKLHVNVSV FESYCCHLER EVSIGGGYQI EKALRCAEEI
201: KSRQIVQDPK HHHHHQFSRI ML

Arabidopsis Description

CYCU2-1Cycp3 [Source:UniProtKB/TrEMBL;Acc:A0A178VTM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.