Factsheet for AT2G45080.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004888.1-P	Field mustard	mitochondrion, plastid	94.59	94.59
CDX74709	Canola	mitochondrion, plastid	94.59	94.59
CDY18953	Canola	mitochondrion, plastid	94.14	94.14
Bra000369.1-P	Field mustard	plastid	92.79	91.96
CDX95626	Canola	mitochondrion, plastid	92.34	91.52
CDX83405	Canola	mitochondrion, plastid	92.34	91.52
AT3G60550.1	Thale cress	mitochondrion, nucleus, plastid	88.74	85.65
VIT_15s0021g02680.t01	Wine grape	plastid	75.68	73.36
KRH76137	Soybean	plastid	73.87	73.21
PGSC0003DMT400066949	Potato	nucleus	72.52	73.18
Solyc01g090800.2.1	Tomato	cytosol	72.52	73.18
KRG88936	Soybean	nucleus	73.42	73.09
KRH65411	Soybean	cytosol, nucleus, plastid	73.42	72.77
GSMUA_Achr4P24630_001	Banana	nucleus	57.21	54.74
Os04t0552300-01	Rice	cytosol	47.3	48.39
TraesCS2A01G413300.1	Wheat	cytosol	44.14	42.42
TraesCS2B01G432000.1	Wheat	cytosol	43.69	41.81
TraesCS2D01G411300.1	Wheat	cytosol	43.69	41.81
Zm00001d002733_P001	Maize	cytosol	43.69	40.93
EES11236	Sorghum	cytosol	42.79	40.6
AT2G44740.1	Thale cress	cytosol	33.33	36.63
AT3G63120.2	Thale cress	cytosol	34.23	34.39
AT3G21870.1	Thale cress	cytosol	30.63	32.38
AT5G07450.1	Thale cress	nucleus	30.63	31.48
AT5G61650.1	Thale cress	nucleus	30.63	31.05
AT3G05327.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	27.93	29.25

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.7	EntrezGene:819115	UniProt:A0A178VTM7	ProteinID:AEC10506.1	ArrayExpress:AT2G45080
EnsemblPlantsGene:AT2G45080	RefSeq:AT2G45080	TAIR:AT2G45080	RefSeq:AT2G45080-TAIR-G	EnsemblPlants:AT2G45080.1	TAIR:AT2G45080.1
EMBL:AY074650	InterPro:Cyclin-like_sf	InterPro:Cyclin_P/U	InterPro:Cyclin_PHO80-like	GO:GO:0000079	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019901	GO:GO:0051301	RefSeq:NP_182034.1	ProteinID:OAP09148.1
PFAM:PF08613	PIRSF:PIRSF027110	PO:PO:0000037	PO:PO:0000230	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009052	PO:PO:0020038	PO:PO:0020100	PO:PO:0025022	PANTHER:PTHR15615
PANTHER:PTHR15615:SF15	UniProt:Q9SHD3	SUPFAM:SSF47954	UniParc:UPI00000336E9	Symbol:cycp3;1	SEG:seg

Description

CYCU2-1Cycp3 [Source:UniProtKB/TrEMBL;Acc:A0A178VTM7]

Coordinates

chr2:+:18591628..18592729

Molecular Weight (calculated)

25820.1 Da

IEP (calculated)

8.201

GRAVY (calculated)

-0.237

Length

222 amino acids

Sequence
(BLAST)

001: MDSLAISPRK LRSDLYSYSY QDDSNTVPLV ISVLSSLIER TLARNERISR SYGGFGKTRV FDCREIPDMT IQSYLERIFR YTKAGPSVYV VAYVYIDRFC
101: QNNQGFRISL TNVHRLLITT IMIASKYVED MNYKNSYFAK VGGLETEDLN NLELEFLFLM GFKLHVNVSV FESYCCHLER EVSIGGGYQI EKALRCAEEI
201: KSRQIVQDPK HHHHHQFSRI ML

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.