Factsheet for Bra000369.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018036.1-P
Bra029917.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45080.1	Bra018036.1-P	AT3G48750.1	15197472
AT2G45080.1	Bra029917.1-P	AT3G48750.1	15197472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83405	Canola	mitochondrion, plastid	99.55	99.55
CDX95626	Canola	mitochondrion, plastid	99.55	99.55
AT2G45080.1	Thale cress	cytosol	91.96	92.79
Bra004888.1-P	Field mustard	mitochondrion, plastid	91.52	92.34
Bra007544.1-P	Field mustard	plastid	86.16	82.83
Bra003420.1-P	Field mustard	cytosol	80.36	81.82
KRH76137	Soybean	plastid	73.66	73.66
Solyc01g090800.2.1	Tomato	cytosol	72.32	73.64
VIT_15s0021g02680.t01	Wine grape	plastid	75.0	73.36
PGSC0003DMT400066949	Potato	nucleus	71.88	73.18
KRG88936	Soybean	nucleus	72.32	72.65
KRH65411	Soybean	cytosol, nucleus, plastid	72.32	72.32
GSMUA_Achr4P24630_001	Banana	nucleus	56.7	54.74
Os04t0552300-01	Rice	cytosol	45.98	47.47
Zm00001d002733_P001	Maize	cytosol	44.64	42.19
TraesCS2A01G413300.1	Wheat	cytosol	43.3	41.99
TraesCS2B01G432000.1	Wheat	cytosol	42.86	41.38
TraesCS2D01G411300.1	Wheat	cytosol	42.86	41.38
EES11236	Sorghum	cytosol	42.41	40.6
Bra037638.1-P	Field mustard	cytosol	33.04	36.82
Bra000361.1-P	Field mustard	cytosol	32.59	36.68
Bra031315.1-P	Field mustard	cytosol	33.93	36.19
Bra004863.1-P	Field mustard	nucleus	33.48	33.78
Bra007729.1-P	Field mustard	cytosol	32.14	32.43
Bra009262.1-P	Field mustard	nucleus	31.25	32.41
Bra012933.1-P	Field mustard	nucleus	15.62	30.97

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.7	EnsemblPlantsGene:Bra000369	EnsemblPlants:Bra000369.1	EnsemblPlants:Bra000369.1-P	InterPro:Cyclin-like_sf
InterPro:Cyclin_P/U	InterPro:Cyclin_PHO80-like	GO:GO:0000079	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019901	UniProt:M4C841	PFAM:PF08613	PIRSF:PIRSF027110	PANTHER:PTHR15615	PANTHER:PTHR15615:SF15
SUPFAM:SSF47954	UniParc:UPI000253FE32	:	:	:	:

Description

AT2G45080 (E=2e-117) cycp3;1 | cycp3;1 (cyclin p3;1); cyclin-dependent protein kinase

Coordinates

chrA03:+:10775975..10776763

Molecular Weight (calculated)

25725.0 Da

IEP (calculated)

8.122

GRAVY (calculated)

-0.162

Length

224 amino acids

Sequence
(BLAST)

001: MAPSSSLAIS PRKLRSDLYS YSYRDGSNTP LVISVLSSVI ERTVARNERI SPSYGGFGKT CVFDCMEVPD MTIQSYLERI FRYTKAGPSV YVVAYVYIDR
101: FCQNNQGFRI SLTNVHRLLI TTIMIASKYV EDMNYRNSYF AKVGGLETED LNNMELEFLF LMGFKLHVNV SVFESYCCHL EREVSIGGGY QIEKALRCAE
201: EIKSKQIVQD PKHHHHHQFS RVLL

Best Arabidopsis Sequence Match ( AT2G45080.1 )
(BLAST)

001: MDSLAISPRK LRSDLYSYSY QDDSNTVPLV ISVLSSLIER TLARNERISR SYGGFGKTRV FDCREIPDMT IQSYLERIFR YTKAGPSVYV VAYVYIDRFC
101: QNNQGFRISL TNVHRLLITT IMIASKYVED MNYKNSYFAK VGGLETEDLN NLELEFLFLM GFKLHVNVSV FESYCCHLER EVSIGGGYQI EKALRCAEEI
201: KSRQIVQDPK HHHHHQFSRI ML

Arabidopsis Description

CYCU2-1Cycp3 [Source:UniProtKB/TrEMBL;Acc:A0A178VTM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.