Factsheet for Bra004863.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018036.1-P
Bra029917.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44740.1	Bra018036.1-P	AT3G48750.1	15197472
AT2G44740.1	Bra029917.1-P	AT3G48750.1	15197472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74684	Canola	cytosol	86.04	84.51
Bra037638.1-P	Field mustard	cytosol	75.23	83.08
Bra000361.1-P	Field mustard	cytosol	74.32	82.91
AT2G44740.1	Thale cress	cytosol	73.87	81.19
KRH71916	Soybean	cytosol	35.59	79.0
KRH48888	Soybean	nucleus	60.81	66.83
KRH66451	Soybean	cytosol	59.91	63.64
Bra012933.1-P	Field mustard	nucleus	30.18	59.29
KRH07327	Soybean	endoplasmic reticulum, extracellular	35.59	52.32
GSMUA_Achr2P10440_001	Banana	cytosol	45.95	51.78
Bra009262.1-P	Field mustard	nucleus	48.2	49.54
Os10t0563900-01	Rice	nucleus	44.14	46.23
GSMUA_Achr5P12540_001	Banana	cytosol, nucleus, plastid	42.34	45.63
OQU85741	Sorghum	extracellular	30.18	45.58
GSMUA_Achr1P00510_001	Banana	nucleus	41.89	45.37
HORVU6Hr1G061870.1	Barley	cytosol	40.09	42.38
TraesCS6D01G223800.1	Wheat	cytosol	39.64	42.31
Zm00001d029970_P001	Maize	nucleus	42.79	42.04
TraesCS6B01G282600.1	Wheat	cytosol	39.19	41.83
Os04t0544200-01	Rice	nucleus	39.64	41.51
TraesCS1D01G218800.1	Wheat	nucleus	45.05	41.49
TraesCS2D01G389800.1	Wheat	nucleus	40.99	41.18
TraesCS1A01G217000.1	Wheat	cytosol	45.05	41.15
TraesCS2B01G410000.1	Wheat	nucleus	40.54	41.1
Zm00001d002788_P001	Maize	cytosol	38.29	41.06
TraesCS1B01G230100.1	Wheat	nucleus	45.5	41.06
TraesCS6A01G241800.1	Wheat	nucleus	39.19	41.04
Os02t0652000-01	Rice	cytosol	38.74	40.57
EER94473	Sorghum	nucleus	43.24	40.34
Zm00001d017441_P001	Maize	cytosol	37.84	40.19
EES12591	Sorghum	cytosol	39.19	39.91
Bra007729.1-P	Field mustard	cytosol	38.29	38.29
Bra031315.1-P	Field mustard	cytosol	34.23	36.19
Bra004888.1-P	Field mustard	mitochondrion, plastid	36.04	36.04
TraesCS2A01G391500.1	Wheat	nucleus	40.54	35.86
HORVU2Hr1G093210.7	Barley	nucleus	24.77	35.48
Bra003420.1-P	Field mustard	cytosol	33.78	34.09
Bra000369.1-P	Field mustard	plastid	33.78	33.48
Bra007544.1-P	Field mustard	plastid	34.68	33.05
HORVU1Hr1G055470.2	Barley	plastid	45.05	31.45

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.7	EnsemblPlantsGene:Bra004863	EnsemblPlants:Bra004863.1	EnsemblPlants:Bra004863.1-P	InterPro:Cyclin-like_sf
InterPro:Cyclin_P/U	InterPro:Cyclin_PHO80-like	GO:GO:0000079	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019901	UniProt:M4CKX7	PFAM:PF08613	PIRSF:PIRSF027110	PANTHER:PTHR15615	PANTHER:PTHR15615:SF28
SUPFAM:SSF47954	UniParc:UPI0002547E2C	SEG:seg	:	:	:

Description

AT2G44740 (E=9e-078) CYCP4;1 | CYCP4;1 (cyclin p4;1); cyclin-dependent protein kinase

Coordinates

chrA05:-:2164973..2166282

Molecular Weight (calculated)

25465.8 Da

IEP (calculated)

9.311

GRAVY (calculated)

-0.042

Length

222 amino acids

Sequence
(BLAST)

001: MAELENPGVM PKLISFLSSL LERVSESNDL TRRVTTQSQS VSVFEGLSRP PITIQSYLER IFKYANCSPS CFVVAYVYLD RFTHRQPSLP INSFNVHRLL
101: ITSVMVSAKF LDDRYYNNAY YAKVGGISTK EMNLLELDFL FGLGFDLNVT PNTFHAYFSY LKKEMTLLQP LSRSCPIKTC PYLQRRRSFS SATTTTRCLI
201: PKMFFFLSCS VEISRQGHSY LS

Best Arabidopsis Sequence Match ( AT2G44740.1 )
(BLAST)

001: MAELENPSVM SKLIAFLSSL LERVAESNDL TRRVATQSQR VSVFHGLSRP TITIQSYLER IFKYANCSPS CFVVAYVYLD RFTHRQPSLP INSFNVHRLL
101: ITSVMVAAKF LDDLYYNNAY YAKVGGISTK EMNFLELDFL FGLGFELNVT PNTFNAYFSY LQKEMTLLQP LSLVVVPSSR SLITFNDDEA SHQKQQQQQL
201: AV

Arabidopsis Description

CYCU4-1Cyclin-U4-1 [Source:UniProtKB/Swiss-Prot;Acc:O80513]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.