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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48257 Canola cytosol 78.32 88.94
Bra004863.1-P Field mustard nucleus 84.51 86.04
CDY30482 Canola cytosol 76.11 85.57
CDY23452 Canola cytosol 76.11 85.57
CDX83419 Canola cytosol 75.22 85.0
CDX95612 Canola cytosol 74.34 84.85
AT2G44740.1 Thale cress cytosol 74.34 83.17
KRH71916 Soybean cytosol 34.51 78.0
KRH48888 Soybean nucleus 60.62 67.82
KRH66451 Soybean cytosol 59.29 64.11
CDY02124 Canola nucleus 30.09 60.18
GSMUA_Achr2P10440_001 Banana cytosol 45.58 52.28
KRH07327 Soybean endoplasmic reticulum, extracellular 34.51 51.66
CDY08862 Canola cytosol 47.35 50.71
CDX70040 Canola nucleus 47.35 49.54
CDY65234 Canola nucleus 46.9 49.07
Os10t0563900-01 Rice nucleus 43.36 46.23
GSMUA_Achr5P12540_001 Banana cytosol, nucleus, plastid 42.04 46.12
GSMUA_Achr1P00510_001 Banana nucleus 41.59 45.85
OQU85741 Sorghum extracellular 29.65 45.58
Zm00001d029970_P001 Maize nucleus 42.48 42.48
HORVU6Hr1G061870.1 Barley cytosol 38.94 41.9
TraesCS6D01G223800.1 Wheat cytosol 38.5 41.83
TraesCS6B01G282600.1 Wheat cytosol 38.05 41.35
TraesCS1D01G218800.1 Wheat nucleus 43.81 41.08
Zm00001d002788_P001 Maize cytosol 37.61 41.06
Os04t0544200-01 Rice nucleus 38.5 41.04
TraesCS1A01G217000.1 Wheat cytosol 43.81 40.74
TraesCS2D01G389800.1 Wheat nucleus 39.82 40.72
TraesCS1B01G230100.1 Wheat nucleus 44.25 40.65
TraesCS2B01G410000.1 Wheat nucleus 39.38 40.64
CDY55656 Canola cytosol 17.26 40.62
TraesCS6A01G241800.1 Wheat nucleus 38.05 40.57
Os02t0652000-01 Rice cytosol 38.05 40.57
EER94473 Sorghum nucleus 42.48 40.34
Zm00001d017441_P001 Maize cytosol 37.17 40.19
EES12591 Sorghum cytosol 38.5 39.91
CDX76682 Canola cytosol 37.61 38.46
CDY56463 Canola cytosol 37.61 38.29
CDY64256 Canola cytosol 14.6 37.5
CDY18953 Canola mitochondrion, plastid 35.84 36.49
CDX74709 Canola mitochondrion, plastid 35.84 36.49
CDY02123 Canola mitochondrion 17.26 35.78
CDY38647 Canola cytosol 33.19 35.71
TraesCS2A01G391500.1 Wheat nucleus 39.38 35.46
CDY54190 Canola cytosol 32.74 35.24
CDY18769 Canola nucleus 32.74 34.91
HORVU2Hr1G093210.7 Barley nucleus 23.89 34.84
CDY18791 Canola nucleus 32.74 34.58
CDX83405 Canola mitochondrion, plastid 33.63 33.93
CDX95626 Canola mitochondrion, plastid 33.63 33.93
CDY41156 Canola plastid 34.51 33.48
CDY27777 Canola cytosol 30.97 33.02
CDX67834 Canola cytosol 33.63 32.9
CDX71800 Canola plastid 34.07 32.77
CDX98427 Canola cytosol 33.19 32.33
HORVU1Hr1G055470.2 Barley plastid 44.25 31.45
CDY05158 Canola cytosol, nucleus, peroxisome 32.3 22.96
Protein Annotations
Gene3D:1.10.472.10MapMan:13.1.1.1.7GO:A0A078CEX2EnsemblPlants:CDX74684ProteinID:CDX74684ProteinID:CDX74684.1
InterPro:Cyclin-like_sfInterPro:Cyclin_P/UInterPro:Cyclin_PHO80-likeGO:GO:0000079GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0006464GO:GO:0007049GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0019538GO:GO:0019901EnsemblPlantsGene:GSBRNA2T00116636001PFAM:PF08613PIRSF:PIRSF027110PANTHER:PTHR15615
PANTHER:PTHR15615:SF28SUPFAM:SSF47954UniParc:UPI0004EEE4A2SEG:seg::
Description
BnaA05g04300D
Coordinates
chrLK031802:-:144835..146357
Molecular Weight (calculated)
25739.1 Da
IEP (calculated)
9.013
GRAVY (calculated)
0.036
Length
226 amino acids
Sequence
(BLAST)
001: MAELENPGVM PKLISFLSSL LERVSETNDL IRRVTTQSQS VSVFEGLSRP PITIQSYLER IFKYANCSPS CFVVAYVYLD RFTHRQPSLP INSFNVHRLL
101: ITSVMVSAKF LDDRYYNNAY YAKVGGISTK EMNLLELDFL FGLGFDLNVT PNTFHAYFSY LKKEMTLLQP LSLVLVPSRP VNLSLPSTTK KLLISNNNNN
201: SLFDFKNVFF LSCSVEISRQ GHSYLS
Best Arabidopsis Sequence Match ( AT3G63120.2 )
(BLAST)
001: MDSLATDPAF IDSDVYLRLG LIIEGKRLKK PPTVLSRLSS SLERSLLLNH DDKILLGSPD SVTVFDGRSP PEISIAHYLD RIFKYSCCSP SCFVIAHIYI
101: DHFLHKTRAL LKPLNVHRLI ITTVMLAAKV FDDRYFNNAY YARVGGVTTR ELNRLEMELL FTLDFKLQVD PQTFHTHCCQ LEKQNRDGFQ IEWPIKEACR
201: ANKETWQKRT PDSLCSQTTA R
Arabidopsis Description
CYCU3-1Cyclin-U3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB60]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.