Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- endoplasmic reticulum 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007729.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX76682 | Canola | cytosol | 95.05 | 95.48 |
| AT3G63120.2 | Thale cress | cytosol | 77.93 | 78.28 |
| PGSC0003DMT400033559 | Potato | nucleus | 48.65 | 49.77 |
| KRH67205 | Soybean | nucleus | 48.2 | 49.31 |
| VIT_07s0104g00540.t01 | Wine grape | nucleus | 49.1 | 48.23 |
| Solyc09g065200.2.1 | Tomato | nucleus | 48.2 | 45.15 |
| KRG95527 | Soybean | nucleus | 48.65 | 43.9 |
| CDY48257 | Canola | cytosol | 37.84 | 42.21 |
| CDY30482 | Canola | cytosol | 37.84 | 41.79 |
| CDY23452 | Canola | cytosol | 37.84 | 41.79 |
| CDX95612 | Canola | cytosol | 36.49 | 40.91 |
| CDY55656 | Canola | cytosol | 17.57 | 40.62 |
| CDX83419 | Canola | cytosol | 36.49 | 40.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.24 | 40.17 |
| Os05t0398000-01 | Rice | cytosol | 24.32 | 39.13 |
| CDY64256 | Canola | cytosol | 15.32 | 38.64 |
| TraesCS1B01G260000.1 | Wheat | nucleus | 40.99 | 38.08 |
| CDX74684 | Canola | cytosol | 38.29 | 37.61 |
| TraesCS1A01G249300.1 | Wheat | nucleus | 40.09 | 37.24 |
| TraesCS1D01G248800.1 | Wheat | nucleus | 39.19 | 37.18 |
| EES19489 | Sorghum | cytosol | 39.64 | 37.13 |
| CDY27777 | Canola | cytosol | 35.14 | 36.79 |
| CDY18769 | Canola | nucleus | 35.14 | 36.79 |
| Zm00001d038133_P002 | Maize | nucleus | 38.29 | 36.02 |
| CDY18791 | Canola | nucleus | 34.68 | 35.98 |
| CDY02124 | Canola | nucleus | 17.12 | 33.63 |
| CDY18953 | Canola | mitochondrion, plastid | 32.88 | 32.88 |
| CDX74709 | Canola | mitochondrion, plastid | 32.88 | 32.88 |
| CDY54190 | Canola | cytosol | 30.63 | 32.38 |
| CDY38647 | Canola | cytosol | 30.63 | 32.38 |
| CDX95626 | Canola | mitochondrion, plastid | 32.43 | 32.14 |
| CDX83405 | Canola | mitochondrion, plastid | 32.43 | 32.14 |
| CDX67834 | Canola | cytosol | 32.88 | 31.6 |
| CDY41156 | Canola | plastid | 32.88 | 31.33 |
| CDX98427 | Canola | cytosol | 32.43 | 31.03 |
| CDX70040 | Canola | nucleus | 30.18 | 31.02 |
| CDY08862 | Canola | cytosol | 29.28 | 30.81 |
| CDX71800 | Canola | plastid | 32.43 | 30.64 |
| CDY65234 | Canola | nucleus | 29.28 | 30.09 |
| HORVU1Hr1G062210.1 | Barley | nucleus, plastid | 38.74 | 28.29 |
| CDY05158 | Canola | cytosol, nucleus, peroxisome | 34.23 | 23.9 |
| CDY02123 | Canola | mitochondrion | 9.46 | 19.27 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.7 | GO:A0A078J0J1 | UniProt:A0A078J0J1 | EnsemblPlants:CDY56463 | ProteinID:CDY56463 |
| ProteinID:CDY56463.1 | InterPro:Cyclin-like_sf | InterPro:Cyclin_P/U | InterPro:Cyclin_PHO80-like | GO:GO:0000079 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019901 | EnsemblPlantsGene:GSBRNA2T00019612001 | PFAM:PF08613 | PIRSF:PIRSF027110 |
| PANTHER:PTHR15615 | PANTHER:PTHR15615:SF40 | SUPFAM:SSF47954 | UniParc:UPI0002542BA0 | SEG:seg | : |
Description
BnaA09g55780DBnaA09g55780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0J1]
Coordinates
chrLK033491:+:55137..56347
Molecular Weight (calculated)
25348.5 Da
IEP (calculated)
8.571
GRAVY (calculated)
-0.205
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: METLATDPGF NDSGVYLRLG LIVEGKRLKK PPALLSRLAS SLERSLLLHD KSISPPEFQH STVTVFDGRS PPEITISDYL DRIFIYSRCS PSCFVVAYIY
101: ILQFLDVTRA HLTPLNVHRL VVTSVMLAAK VFDDRYYNNA YYARVGGVST RELNRLEMKL LFALDFKLQV DPRTFHTHCC QLEKQNSDGI QIEWPIKEAC
201: RANKETWRKS TPESVCSQTT AR
101: ILQFLDVTRA HLTPLNVHRL VVTSVMLAAK VFDDRYYNNA YYARVGGVST RELNRLEMKL LFALDFKLQV DPRTFHTHCC QLEKQNSDGI QIEWPIKEAC
201: RANKETWRKS TPESVCSQTT AR
001: MDSLATDPAF IDSDVYLRLG LIIEGKRLKK PPTVLSRLSS SLERSLLLNH DDKILLGSPD SVTVFDGRSP PEISIAHYLD RIFKYSCCSP SCFVIAHIYI
101: DHFLHKTRAL LKPLNVHRLI ITTVMLAAKV FDDRYFNNAY YARVGGVTTR ELNRLEMELL FTLDFKLQVD PQTFHTHCCQ LEKQNRDGFQ IEWPIKEACR
201: ANKETWQKRT PDSLCSQTTA R
101: DHFLHKTRAL LKPLNVHRLI ITTVMLAAKV FDDRYFNNAY YARVGGVTTR ELNRLEMELL FTLDFKLQVD PQTFHTHCCQ LEKQNRDGFQ IEWPIKEACR
201: ANKETWQKRT PDSLCSQTTA R
Arabidopsis Description
CYCU3-1Cyclin-U3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB60]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.