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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0398000-01 Rice cytosol 34.73 60.14
KRH67205 Soybean nucleus 53.14 58.53
VIT_07s0104g00540.t01 Wine grape nucleus 54.39 57.52
Zm00001d038133_P002 Maize nucleus 53.56 54.24
EES19489 Sorghum cytosol 53.56 54.01
PGSC0003DMT400033559 Potato nucleus 48.95 53.92
KRG96839 Soybean nucleus 38.91 52.84
KRG95527 Soybean nucleus 53.56 52.03
TraesCS1D01G248800.1 Wheat nucleus 49.79 50.85
TraesCS1A01G249300.1 Wheat nucleus 50.21 50.21
TraesCS1B01G260000.1 Wheat nucleus 49.79 49.79
Solyc09g065200.2.1 Tomato nucleus 48.95 49.37
PGSC0003DMT400008886 Potato nucleus 44.35 46.9
Solyc01g098930.2.1 Tomato cytosol 43.51 46.02
AT3G05327.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 40.17 45.28
PGSC0003DMT400081162 Potato cytosol 18.83 45.0
CDY27777 Canola cytosol 39.75 44.81
AT3G63120.2 Thale cress cytosol 41.42 44.8
CDX76682 Canola cytosol 40.59 43.89
VIT_14s0128g00410.t01 Wine grape nucleus 38.91 43.66
GSMUA_Achr2P10440_001 Banana cytosol 35.98 43.65
CDY18791 Canola nucleus 38.91 43.46
CDY18769 Canola nucleus 38.49 43.4
CDY56463 Canola cytosol 40.17 43.24
Bra007729.1-P Field mustard cytosol 40.17 43.24
GSMUA_Achr5P12540_001 Banana cytosol, nucleus, plastid 34.31 39.81
HORVU1Hr1G062210.1 Barley nucleus, plastid 49.37 38.82
GSMUA_Achr1P00510_001 Banana nucleus 32.22 37.56
GSMUA_Achr11P... Banana mitochondrion 24.69 34.1
GSMUA_Achr4P24630_001 Banana nucleus 28.03 28.88
CDY05158 Canola cytosol, nucleus, peroxisome 36.4 27.36
Protein Annotations
Gene3D:1.10.472.10MapMan:13.1.1.1.7ncoils:CoilInterPro:Cyclin-like_sfInterPro:Cyclin_PHO80-likeGO:GO:0000079
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0006464GO:GO:0007049GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0019538GO:GO:0019901EnsemblPlantsGene:GSMUA_AchrUn_randomG21170_001EnsemblPlants:GSMUA_AchrUn_randomP21170_001
EnsemblPlants:GSMUA_AchrUn_randomT21170_001UniProt:M0UB25PFAM:PF08613PANTHER:PTHR15615PANTHER:PTHR15615:SF40SUPFAM:SSF47954
UniParc:UPI000296C96B:::::
Description
Cyclin-P3-1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG21170_001]
Coordinates
chrchrUn_random:-:103084106..103088316
Molecular Weight (calculated)
27478.3 Da
IEP (calculated)
8.857
GRAVY (calculated)
-0.157
Length
239 amino acids
Sequence
(BLAST)
001: MKSMTPDTEA VNPEVYQALG LSTSSKRVAE FPRVLTLLSS ILEATVQKNE KKLDSLEIKE FVTLFDGMRA PTLSIKKYME RIFKYSKCSP SCFVLAYIYI
101: ERFLQQPNIC LTSLNVHRLL IASVVVAAKF IDDAFFSNAY YAKVGGISTM EMNRLEINFL FSVDFRLQVT VGTFEAYCLR LEKENKVYQV ERPIKTCGLN
201: EWSNIEDSKC QSAVQRCSCG TVTFNQLYYD SQKKHKHRR
Best Arabidopsis Sequence Match ( AT3G63120.2 )
(BLAST)
001: MDSLATDPAF IDSDVYLRLG LIIEGKRLKK PPTVLSRLSS SLERSLLLNH DDKILLGSPD SVTVFDGRSP PEISIAHYLD RIFKYSCCSP SCFVIAHIYI
101: DHFLHKTRAL LKPLNVHRLI ITTVMLAAKV FDDRYFNNAY YARVGGVTTR ELNRLEMELL FTLDFKLQVD PQTFHTHCCQ LEKQNRDGFQ IEWPIKEACR
201: ANKETWQKRT PDSLCSQTTA R
Arabidopsis Description
CYCU3-1Cyclin-U3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB60]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.