Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Os05t0398000-01 | Rice | cytosol | 34.73 | 60.14 |
KRH67205 | Soybean | nucleus | 53.14 | 58.53 |
VIT_07s0104g00540.t01 | Wine grape | nucleus | 54.39 | 57.52 |
Zm00001d038133_P002 | Maize | nucleus | 53.56 | 54.24 |
EES19489 | Sorghum | cytosol | 53.56 | 54.01 |
PGSC0003DMT400033559 | Potato | nucleus | 48.95 | 53.92 |
KRG96839 | Soybean | nucleus | 38.91 | 52.84 |
KRG95527 | Soybean | nucleus | 53.56 | 52.03 |
TraesCS1D01G248800.1 | Wheat | nucleus | 49.79 | 50.85 |
TraesCS1A01G249300.1 | Wheat | nucleus | 50.21 | 50.21 |
TraesCS1B01G260000.1 | Wheat | nucleus | 49.79 | 49.79 |
Solyc09g065200.2.1 | Tomato | nucleus | 48.95 | 49.37 |
PGSC0003DMT400008886 | Potato | nucleus | 44.35 | 46.9 |
Solyc01g098930.2.1 | Tomato | cytosol | 43.51 | 46.02 |
AT3G05327.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 40.17 | 45.28 |
PGSC0003DMT400081162 | Potato | cytosol | 18.83 | 45.0 |
CDY27777 | Canola | cytosol | 39.75 | 44.81 |
AT3G63120.2 | Thale cress | cytosol | 41.42 | 44.8 |
CDX76682 | Canola | cytosol | 40.59 | 43.89 |
VIT_14s0128g00410.t01 | Wine grape | nucleus | 38.91 | 43.66 |
GSMUA_Achr2P10440_001 | Banana | cytosol | 35.98 | 43.65 |
CDY18791 | Canola | nucleus | 38.91 | 43.46 |
CDY18769 | Canola | nucleus | 38.49 | 43.4 |
CDY56463 | Canola | cytosol | 40.17 | 43.24 |
Bra007729.1-P | Field mustard | cytosol | 40.17 | 43.24 |
GSMUA_Achr5P12540_001 | Banana | cytosol, nucleus, plastid | 34.31 | 39.81 |
HORVU1Hr1G062210.1 | Barley | nucleus, plastid | 49.37 | 38.82 |
GSMUA_Achr1P00510_001 | Banana | nucleus | 32.22 | 37.56 |
GSMUA_Achr11P... | Banana | mitochondrion | 24.69 | 34.1 |
GSMUA_Achr4P24630_001 | Banana | nucleus | 28.03 | 28.88 |
CDY05158 | Canola | cytosol, nucleus, peroxisome | 36.4 | 27.36 |
Protein Annotations
Gene3D:1.10.472.10 | MapMan:13.1.1.1.7 | ncoils:Coil | InterPro:Cyclin-like_sf | InterPro:Cyclin_PHO80-like | GO:GO:0000079 |
GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019901 | EnsemblPlantsGene:GSMUA_AchrUn_randomG21170_001 | EnsemblPlants:GSMUA_AchrUn_randomP21170_001 |
EnsemblPlants:GSMUA_AchrUn_randomT21170_001 | UniProt:M0UB25 | PFAM:PF08613 | PANTHER:PTHR15615 | PANTHER:PTHR15615:SF40 | SUPFAM:SSF47954 |
UniParc:UPI000296C96B | : | : | : | : | : |
Description
Cyclin-P3-1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG21170_001]
Coordinates
chrchrUn_random:-:103084106..103088316
Molecular Weight (calculated)
27478.3 Da
IEP (calculated)
8.857
GRAVY (calculated)
-0.157
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSMTPDTEA VNPEVYQALG LSTSSKRVAE FPRVLTLLSS ILEATVQKNE KKLDSLEIKE FVTLFDGMRA PTLSIKKYME RIFKYSKCSP SCFVLAYIYI
101: ERFLQQPNIC LTSLNVHRLL IASVVVAAKF IDDAFFSNAY YAKVGGISTM EMNRLEINFL FSVDFRLQVT VGTFEAYCLR LEKENKVYQV ERPIKTCGLN
201: EWSNIEDSKC QSAVQRCSCG TVTFNQLYYD SQKKHKHRR
101: ERFLQQPNIC LTSLNVHRLL IASVVVAAKF IDDAFFSNAY YAKVGGISTM EMNRLEINFL FSVDFRLQVT VGTFEAYCLR LEKENKVYQV ERPIKTCGLN
201: EWSNIEDSKC QSAVQRCSCG TVTFNQLYYD SQKKHKHRR
001: MDSLATDPAF IDSDVYLRLG LIIEGKRLKK PPTVLSRLSS SLERSLLLNH DDKILLGSPD SVTVFDGRSP PEISIAHYLD RIFKYSCCSP SCFVIAHIYI
101: DHFLHKTRAL LKPLNVHRLI ITTVMLAAKV FDDRYFNNAY YARVGGVTTR ELNRLEMELL FTLDFKLQVD PQTFHTHCCQ LEKQNRDGFQ IEWPIKEACR
201: ANKETWQKRT PDSLCSQTTA R
101: DHFLHKTRAL LKPLNVHRLI ITTVMLAAKV FDDRYFNNAY YARVGGVTTR ELNRLEMELL FTLDFKLQVD PQTFHTHCCQ LEKQNRDGFQ IEWPIKEACR
201: ANKETWQKRT PDSLCSQTTA R
Arabidopsis Description
CYCU3-1Cyclin-U3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB60]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.