Factsheet for Bra007729.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
endoplasmic reticulum 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56463	Canola	cytosol	100.0	100.0
AT3G63120.2	Thale cress	cytosol	77.93	78.28
PGSC0003DMT400033559	Potato	nucleus	48.65	49.77
KRH67205	Soybean	nucleus	48.2	49.31
VIT_07s0104g00540.t01	Wine grape	nucleus	49.1	48.23
Solyc09g065200.2.1	Tomato	nucleus	48.2	45.15
KRG95527	Soybean	nucleus	48.65	43.9
Bra037638.1-P	Field mustard	cytosol	37.84	41.79
Bra000361.1-P	Field mustard	cytosol	36.49	40.7
GSMUA_AchrUn_...	Banana	nucleus	43.24	40.17
Os05t0398000-01	Rice	cytosol	24.32	39.13
Bra004863.1-P	Field mustard	nucleus	38.29	38.29
TraesCS1B01G260000.1	Wheat	nucleus	40.99	38.08
TraesCS1A01G249300.1	Wheat	nucleus	40.09	37.24
TraesCS1D01G248800.1	Wheat	nucleus	39.19	37.18
EES19489	Sorghum	cytosol	39.64	37.13
Zm00001d038133_P002	Maize	nucleus	38.29	36.02
Bra012933.1-P	Field mustard	nucleus	17.12	33.63
Bra004888.1-P	Field mustard	mitochondrion, plastid	32.88	32.88
Bra031315.1-P	Field mustard	cytosol	31.08	32.86
Bra003420.1-P	Field mustard	cytosol	31.98	32.27
Bra000369.1-P	Field mustard	plastid	32.43	32.14
Bra007544.1-P	Field mustard	plastid	32.88	31.33
Bra009262.1-P	Field mustard	nucleus	30.18	31.02
HORVU1Hr1G062210.1	Barley	nucleus, plastid	38.74	28.29

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.7	EnsemblPlantsGene:Bra007729	EnsemblPlants:Bra007729.1	EnsemblPlants:Bra007729.1-P	InterPro:Cyclin-like_sf
InterPro:Cyclin_P/U	InterPro:Cyclin_PHO80-like	GO:GO:0000079	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019901	UniProt:M4CU35	PFAM:PF08613	PIRSF:PIRSF027110	PANTHER:PTHR15615	PANTHER:PTHR15615:SF40
SUPFAM:SSF47954	UniParc:UPI0002542BA0	SEG:seg	:	:	:

Description

AT3G63120 (E=1e-089) CYCP1;1 | CYCP1;1 (cyclin p1;1); cyclin-dependent protein kinase

Coordinates

chrA09:-:30597593..30598331

Molecular Weight (calculated)

25348.5 Da

IEP (calculated)

8.571

GRAVY (calculated)

-0.205

Length

222 amino acids

Sequence
(BLAST)

001: METLATDPGF NDSGVYLRLG LIVEGKRLKK PPALLSRLAS SLERSLLLHD KSISPPEFQH STVTVFDGRS PPEITISDYL DRIFIYSRCS PSCFVVAYIY
101: ILQFLDVTRA HLTPLNVHRL VVTSVMLAAK VFDDRYYNNA YYARVGGVST RELNRLEMKL LFALDFKLQV DPRTFHTHCC QLEKQNSDGI QIEWPIKEAC
201: RANKETWRKS TPESVCSQTT AR

Best Arabidopsis Sequence Match ( AT3G63120.2 )
(BLAST)

001: MDSLATDPAF IDSDVYLRLG LIIEGKRLKK PPTVLSRLSS SLERSLLLNH DDKILLGSPD SVTVFDGRSP PEISIAHYLD RIFKYSCCSP SCFVIAHIYI
101: DHFLHKTRAL LKPLNVHRLI ITTVMLAAKV FDDRYFNNAY YARVGGVTTR ELNRLEMELL FTLDFKLQVD PQTFHTHCCQ LEKQNRDGFQ IEWPIKEACR
201: ANKETWQKRT PDSLCSQTTA R

Arabidopsis Description

CYCU3-1Cyclin-U3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB60]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.