Factsheet for Bra007544.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018036.1-P
Bra029917.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G60550.1	Bra018036.1-P	AT3G48750.1	15197472
AT3G60550.1	Bra029917.1-P	AT3G48750.1	15197472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41156	Canola	plastid	99.14	99.14
CDX71800	Canola	plastid	97.85	97.02
AT3G60550.1	Thale cress	mitochondrion, nucleus, plastid	92.7	93.91
Bra003420.1-P	Field mustard	cytosol	85.84	90.91
Bra004888.1-P	Field mustard	mitochondrion, plastid	83.26	87.39
Bra000369.1-P	Field mustard	plastid	82.83	86.16
KRG88936	Soybean	nucleus	70.39	73.54
KRH76137	Soybean	plastid	69.96	72.77
KRH65411	Soybean	cytosol, nucleus, plastid	69.1	71.88
PGSC0003DMT400066949	Potato	nucleus	67.81	71.82
VIT_15s0021g02680.t01	Wine grape	plastid	70.39	71.62
Solyc01g090800.2.1	Tomato	cytosol	67.38	71.36
GSMUA_Achr4P24630_001	Banana	nucleus	58.8	59.05
Os04t0552300-01	Rice	cytosol	44.64	47.93
Zm00001d002733_P001	Maize	cytosol	42.49	41.77
EES11236	Sorghum	cytosol	41.63	41.45
TraesCS2A01G413300.1	Wheat	cytosol	40.77	41.13
TraesCS2B01G432000.1	Wheat	cytosol	40.34	40.52
TraesCS2D01G411300.1	Wheat	cytosol	40.34	40.52
Bra037638.1-P	Field mustard	cytosol	33.05	38.31
Bra000361.1-P	Field mustard	cytosol	32.62	38.19
Bra004863.1-P	Field mustard	nucleus	33.05	34.68
Bra031315.1-P	Field mustard	cytosol	30.9	34.29
Bra012933.1-P	Field mustard	nucleus	16.31	33.63
Bra007729.1-P	Field mustard	cytosol	31.33	32.88
Bra009262.1-P	Field mustard	nucleus	30.47	32.87

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.7	EnsemblPlantsGene:Bra007544	EnsemblPlants:Bra007544.1	EnsemblPlants:Bra007544.1-P	InterPro:Cyclin-like_sf
InterPro:Cyclin_P/U	InterPro:Cyclin_PHO80-like	GO:GO:0000079	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019901	UniProt:M4CTK0	PFAM:PF08613	PIRSF:PIRSF027110	PANTHER:PTHR15615	PANTHER:PTHR15615:SF15
SUPFAM:SSF47954	UniParc:UPI00025428C0	SEG:seg	:	:	:

Description

AT3G60550 (E=3e-115) CYCP3;2 | CYCP3;2 (cyclin p3;2); cyclin-dependent protein kinase

Coordinates

chrA09:+:29715107..29715897

Molecular Weight (calculated)

26836.4 Da

IEP (calculated)

9.443

GRAVY (calculated)

-0.241

Length

233 amino acids

Sequence
(BLAST)

001: MAVSNSLTIS PRKLRSDLYS YSNQDNTKTP LVISVLSSLI DRTLTRNQRI SRRASPASST SGRSGKTQIF DCREIPDMTI QSYLERIFRY TKAGPSVYVV
101: AYVYIDRFCQ LNPGFRISLA NVHRLLITTI MIASKYVEDL NYRNSYFAKV GGLETEDLNK LELEFLFLMG FKLHVNVSVF ESYCCHLERE VSFGGGYQIE
201: KALRCAEEIK SRQMIVQDPK HHHHHHQFAR VLL

Best Arabidopsis Sequence Match ( AT3G60550.1 )
(BLAST)

001: MAVSNSLTIS PRKLRSDLYS YSYQNNSKTP LVISVLSSLI DRTLTRNERI SRRALPSSGA GGKTQIFDCR EIPDMTIQSY LGRIFRYTKA GPSVYVVAYV
101: YIDRFCQTNP GFRISLTNVH RLLITTIMIA SKYVEDLNYR NSYFAKVGGL ETEDLNKLEL EFLFLMGFKL HVNVSVFESY CCHLEREVSF GGGYQIEKAL
201: RCAEEIKSRQ MIIQDPKHHH HHHQLARILL

Arabidopsis Description

CYCU2-2Cyclin-U2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M205]
SUBAcon: [plastid,nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.