Factsheet for Bra000361.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018036.1-P
Bra029917.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44740.1	Bra018036.1-P	AT3G48750.1	15197472
AT2G44740.1	Bra029917.1-P	AT3G48750.1	15197472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83419	Canola	cytosol	97.99	97.5
CDX95612	Canola	cytosol	96.48	96.97
Bra037638.1-P	Field mustard	cytosol	92.46	91.54
AT2G44740.1	Thale cress	cytosol	91.46	90.1
KRH71916	Soybean	cytosol	39.2	78.0
Bra004863.1-P	Field mustard	nucleus	82.91	74.32
KRH48888	Soybean	nucleus	72.36	71.29
KRH66451	Soybean	cytosol	70.85	67.46
Bra012933.1-P	Field mustard	nucleus	32.66	57.52
GSMUA_Achr2P10440_001	Banana	cytosol	53.27	53.81
KRH07327	Soybean	endoplasmic reticulum, extracellular	39.2	51.66
Bra009262.1-P	Field mustard	nucleus	52.76	48.61
OQU85741	Sorghum	extracellular	35.68	48.3
Os10t0563900-01	Rice	nucleus	50.75	47.64
GSMUA_Achr1P00510_001	Banana	nucleus	48.74	47.32
GSMUA_Achr5P12540_001	Banana	cytosol, nucleus, plastid	48.24	46.6
HORVU6Hr1G061870.1	Barley	cytosol	46.23	43.81
Zm00001d029970_P001	Maize	nucleus	49.75	43.81
Zm00001d017441_P001	Maize	cytosol	45.73	43.54
TraesCS6B01G282600.1	Wheat	cytosol	45.23	43.27
TraesCS6D01G223800.1	Wheat	cytosol	45.23	43.27
Zm00001d002788_P001	Maize	cytosol	44.22	42.51
TraesCS6A01G241800.1	Wheat	nucleus	45.23	42.45
Os04t0544200-01	Rice	nucleus	45.23	42.45
EES12591	Sorghum	cytosol	46.23	42.2
TraesCS2D01G389800.1	Wheat	nucleus	46.73	42.08
EER94473	Sorghum	nucleus	50.25	42.02
TraesCS2B01G410000.1	Wheat	nucleus	46.23	42.01
Os02t0652000-01	Rice	cytosol	44.72	41.98
TraesCS1D01G218800.1	Wheat	nucleus	50.75	41.91
TraesCS1A01G217000.1	Wheat	cytosol	50.75	41.56
TraesCS1B01G230100.1	Wheat	nucleus	51.26	41.46
Bra031315.1-P	Field mustard	cytosol	38.69	36.67
TraesCS2A01G391500.1	Wheat	nucleus	46.23	36.65
Bra007729.1-P	Field mustard	cytosol	40.7	36.49
HORVU2Hr1G093210.7	Barley	nucleus	28.14	36.13
Bra004888.1-P	Field mustard	mitochondrion, plastid	37.69	33.78
Bra003420.1-P	Field mustard	cytosol	37.19	33.64
Bra007544.1-P	Field mustard	plastid	38.19	32.62
Bra000369.1-P	Field mustard	plastid	36.68	32.59
HORVU1Hr1G055470.2	Barley	plastid	51.26	32.08

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.7	EnsemblPlantsGene:Bra000361	EnsemblPlants:Bra000361.1	EnsemblPlants:Bra000361.1-P	InterPro:Cyclin-like_sf
InterPro:Cyclin_P/U	InterPro:Cyclin_PHO80-like	GO:GO:0000079	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019901	UniProt:M4C833	PFAM:PF08613	PIRSF:PIRSF027110	PANTHER:PTHR15615	PANTHER:PTHR15615:SF28
SUPFAM:SSF47954	UniParc:UPI000253FDD1	SEG:seg	:	:	:

Description

AT2G44740 (E=1e-080) CYCP4;1 | CYCP4;1 (cyclin p4;1); cyclin-dependent protein kinase

Coordinates

chrA03:-:10726576..10727426

Molecular Weight (calculated)

22648.2 Da

IEP (calculated)

6.675

GRAVY (calculated)

0.014

Length

199 amino acids

Sequence
(BLAST)

001: MAELENPGVM PKLIAFLSAL LERVAESNDL TRRVTTQSQS DSVFHGLSRP SITIQSYLER IYKYADCSSS CFVVAYVYLD RFTHRQPSLP INSFNVHRLL
101: ITSVMIAAKF LDDLYYNNAY YAKVGGISTK EMNLLELDFL FGLGFDLNVT PNTFHAYFSY LRKEMTLLQP LSLVVVPPRS VITFNDDEAS HQKQQQLAV

Best Arabidopsis Sequence Match ( AT2G44740.1 )
(BLAST)

001: MAELENPSVM SKLIAFLSSL LERVAESNDL TRRVATQSQR VSVFHGLSRP TITIQSYLER IFKYANCSPS CFVVAYVYLD RFTHRQPSLP INSFNVHRLL
101: ITSVMVAAKF LDDLYYNNAY YAKVGGISTK EMNFLELDFL FGLGFELNVT PNTFNAYFSY LQKEMTLLQP LSLVVVPSSR SLITFNDDEA SHQKQQQQQL
201: AV

Arabidopsis Description

CYCU4-1Cyclin-U4-1 [Source:UniProtKB/Swiss-Prot;Acc:O80513]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.