Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRG94254 | |
| KRG94519 | |
| KRG99255 | endoplasmic reticulum |
| KRG99448 | nucleus |
| KRH06950 | |
| KRH11866 | |
| KRH22479 | nucleus |
| KRH24606 | |
| KRH25470 | nucleus |
| KRH26876 | nucleus |
| KRH28363 | nucleus |
| KRH29611 | |
| KRH36887 | |
| KRH42252 | |
| KRH45568 | nucleus |
| KRH45743 | endoplasmic reticulum |
| KRH47306 | |
| KRH54084 | |
| KRH56054 | nucleus |
| KRH56424 | |
| KRH57679 | |
| KRH58370 | |
| KRH62487 | |
| KRH63877 | |
| KRH63879 | |
| KRH69476 | endoplasmic reticulum |
| KRH69654 | nucleus |
| KRH74510 | nucleus |
| KRH74675 | endoplasmic reticulum |
| KRH77118 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46746 | Soybean | nucleus | 84.88 | 86.57 |
| Solyc09g061280.2.1 | Tomato | nucleus | 44.39 | 48.4 |
| PGSC0003DMT400045507 | Potato | nucleus | 45.85 | 47.47 |
| VIT_07s0005g06340.t01 | Wine grape | nucleus | 48.78 | 45.87 |
| KRG92238 | Soybean | nucleus | 46.83 | 42.86 |
| CDY71628 | Canola | nucleus | 40.98 | 42.21 |
| Bra013240.1-P | Field mustard | nucleus | 40.0 | 41.21 |
| CDX93038 | Canola | nucleus | 40.0 | 41.21 |
| AT3G24810.1 | Thale cress | nucleus | 37.56 | 40.74 |
Protein Annotations
| EntrezGene:100782379 | MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | EMBL:ACUP02011302 | InterPro:CDI | EnsemblPlantsGene:GLYMA_18G170800 |
| GO:GO:0003674 | GO:GO:0004860 | GO:GO:0004861 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006469 | GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0071901 | UniProt:I1N296 |
| EnsemblPlants:KRG99786 | ProteinID:KRG99786 | ProteinID:KRG99786.1 | PFAM:PF02234 | PIRSF:PIRSF017811 | PANTHER:PTHR10265 |
| PANTHER:PTHR10265:SF23 | UniParc:UPI0001BA7817 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:40102244..40105782
Molecular Weight (calculated)
23295.4 Da
IEP (calculated)
8.677
GRAVY (calculated)
-0.792
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKYMKKSKI AGDVAAVIME APPPHSHLGV RTRAKTLALQ NTSPDSSAYL QLRSRRLLKL PPTPPENPRR SAAETAANSR LAKTTSSRNA EKFASFDDDN
101: NTECSFGENF LDAEPREERS TRESTPCSFI RDSNAIHTPG STTRPRTRQI IHEHIQRNIP TAYEMEEFFA YAEKQQQTIF MDKYNFDIVN EVPLPGRYEW
201: VPVLH
101: NTECSFGENF LDAEPREERS TRESTPCSFI RDSNAIHTPG STTRPRTRQI IHEHIQRNIP TAYEMEEFFA YAEKQQQTIF MDKYNFDIVN EVPLPGRYEW
201: VPVLH
001: MGKYMKKSKI TGDISVMEVS KATAPSPGVR TRAAKTLALK RLNSSAADSA LPNDSSCYLQ LRSRRLEKPS SLIEPKQPPR VHRSGIKESG SRSRVDSVNS
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MCRATKEYTR EQDNVIPTTS EMEEFFAYAE QQQQRLFMEK
201: YNFDIVNDIP LSGRYEWVQV KP
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MCRATKEYTR EQDNVIPTTS EMEEFFAYAE QQQQRLFMEK
201: YNFDIVNDIP LSGRYEWVQV KP
Arabidopsis Description
KRP3Inhibitor/interactor with cyclin-dependent kinase [Source:UniProtKB/TrEMBL;Acc:F4K388]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.