CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94519	Soybean	nucleus	78.01	63.81
CDX78564	Canola	plastid	56.78	48.37
CDX70546	Canola	plastid	56.01	47.1
CDY58407	Canola	plastid	58.06	47.0
CDX69600	Canola	plastid	57.8	46.79
Os04t0382100-01	Rice	nucleus	41.18	46.53
AT3G01890.1	Thale cress	plastid	53.96	46.07
KRG94254	Soybean	nucleus	62.15	44.75
KRH57679	Soybean	nucleus	61.89	44.57
Bra006242.1-P	Field mustard	plastid	57.29	44.53
VIT_14s0068g02140.t01	Wine grape	plastid	61.13	43.61
AT5G14170.1	Thale cress	plastid	58.82	43.07
GSMUA_Achr9P01520_001	Banana	plastid	52.94	41.99
Solyc02g068100.2.1	Tomato	nucleus	58.31	41.91
GSMUA_Achr6P20740_001	Banana	plastid	52.94	40.04
TraesCS2D01G280300.1	Wheat	plastid	52.43	39.12
TraesCS2B01G298800.1	Wheat	plastid	52.43	39.05
Zm00001d045433_P001	Maize	plastid	24.55	39.02
TraesCS2A01G281500.1	Wheat	nucleus	52.43	38.97
KXG36804	Sorghum	plastid	52.94	38.91
PGSC0003DMT400017831	Potato	nucleus, plastid	56.27	38.53
Zm00001d007039_P001	Maize	plastid	52.17	38.35
Zm00001d022322_P001	Maize	plastid	52.17	38.35
HORVU2Hr1G068970.1	Barley	cytosol	50.13	37.84
KRH57226	Soybean	nucleus	47.06	35.87
KRH63759	Soybean	plastid	48.34	35.73
KRH54192	Soybean	plastid	47.57	34.9
KRH03955	Soybean	nucleus	46.55	34.67

Protein Annotations

EMBL:ACUP02009901	EnsemblPlants:KRH06950	EnsemblPlantsGene:GLYMA_16G057200	Gene3D:1.10.245.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR036885	InterPro:SWIB_MDM2_dom_sf	InterPro:SWIB_MDM2_domain	InterPro:SWIB_domain	PANTHER:PTHR13844
PANTHER:PTHR13844:SF22	PFAM:PF02201	ProteinID:KRH06950	ProteinID:KRH06950.1	SEG:seg	SMART:SM00151
SUPFAM:SSF47592	UniParc:UPI0006EE1466	UniProt:A0A0R0FLV6	MapMan:12.4.2.2	:	:

Description

hypothetical protein

Coordinates

chr16:-:5596182..5597893

Molecular Weight (calculated)

44176.8 Da

IEP (calculated)

9.156

GRAVY (calculated)

-0.503

Length

391 amino acids

Sequence
(BLAST)

001: MSMNNNNNSN PHGPSSSGPV PSFPGPRAHT QPERQTFPSK TPNSHLQTEP APTATAAAAT ARRKKHKPNE RQLREKALAI LPESEIYTQL LDVEARVDAA
101: LARKKVDIQE ALKNPPRIQK TLRILDAPFV SEILCFLNDY TDNNVITWEN SQSSVAHEGF EVKRKGDREF PAQIRLEMNY VPPALREVLG VQVDTRSRIV
201: SAIWYYVKAR KSQNLNDPSF FQCDQALQRV FGEDKVKFTM VLQKISQHLF PSQVILLEHM IKLSGNSPVG SACYDVMVDI PFPIQRELNA LVPNVERTKE
301: NDVCDESICG IIRKIHEHHR RRAFLVGFSQ SSLEFIKALV ESQNKDLKVL LGESGQNAEK DRKSDFFKQP WVEDAIVCYL NRKPAAGSVV K

Best Arabidopsis Sequence Match ( AT3G01890.1 )
(BLAST)

001: MSGNNELNAL KGPQSSLPWP FGMASASFAP SHMAPPNFQP QFQLSQDQGI SAPGRRFPHK PPIGGPPAVP PSMELTPASR KKKHKLPDKS SLQERVAAVL
101: PESALYTQLL EFESRVDAAL FRKKVDIQDS LKNPPSIQKT LRIYVFNTFS NQIPGPDPPT WTLRIFGRVL DPDHTGGLVQ NSNPLYPKFS SFFKTLKISL
201: DQSLYPENHL IEWKRDRSPA PLEGFEIKRI GCQEFAATIL LEMNYVPEKF KTSPALMQVL GIEVDTRPRI IAAIWHYVKV RKLQNPNDPS FFNCDAALHS
301: VFGEEKMKFT MLSHKISQHL SPPPPIQLVH KIKLSGNNPA ISACYDVLVD IPAPVQTELS NLLANPEKNK EIEACDEAIC GAIRKIHEHR RRRAFFLGFS
401: QSPVEFTNAL MESQTKDLKL VAGEASRNAE KEGRSEFFNQ PWVEDAAIRY LNRKPAGG

Arabidopsis Description

At3g01890 [Source:UniProtKB/TrEMBL;Acc:Q147F4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.