CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54192	Soybean	plastid	89.6	88.93
VIT_17s0000g01500.t01	Wine grape	cytosol	49.53	65.66
Os04t0382100-01	Rice	nucleus	38.94	59.54
KRH57226	Soybean	nucleus	54.44	56.14
GSMUA_Achr9P01520_001	Banana	plastid	51.04	54.77
KRH03955	Soybean	nucleus	53.69	54.1
Zm00001d045433_P001	Maize	plastid	24.95	53.66
KRH57679	Soybean	nucleus	54.25	52.85
KRG94254	Soybean	nucleus	54.06	52.67
KRG94519	Soybean	nucleus	46.88	51.88
GSMUA_Achr6P20740_001	Banana	plastid	50.66	51.84
TraesCS2D01G280300.1	Wheat	plastid	49.72	50.19
TraesCS2B01G298800.1	Wheat	plastid	49.72	50.1
TraesCS2A01G281500.1	Wheat	nucleus	49.72	50.0
Zm00001d022322_P001	Maize	plastid	48.77	48.5
KRH06950	Soybean	plastid	35.73	48.34
Zm00001d007039_P001	Maize	plastid	48.58	48.31
KXG36804	Sorghum	plastid	48.39	48.12
HORVU2Hr1G068970.1	Barley	cytosol	46.88	47.88
Solyc03g111250.2.1	Tomato	nucleus	46.5	46.77
PGSC0003DMT400039420	Potato	plastid	45.75	46.01

Protein Annotations

EMBL:ACUP02002710	EnsemblPlants:KRH63759	EnsemblPlantsGene:GLYMA_04G195200	EntrezGene:100784907	Gene3D:1.10.245.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR036885	InterPro:SWIB_MDM2_dom_sf	InterPro:SWIB_MDM2_domain	InterPro:SWIB_domain
PANTHER:PTHR13844	PANTHER:PTHR13844:SF22	PFAM:PF02201	ProteinID:KRH63759	ProteinID:KRH63759.1	SEG:seg
SMART:SM00151	SUPFAM:SSF47592	UniParc:UPI0002339C1E	UniProt:K7KL60	MapMan:12.4.2.2	:

Description

hypothetical protein

Coordinates

chr4:+:46709044..46711962

Molecular Weight (calculated)

59348.0 Da

IEP (calculated)

9.134

GRAVY (calculated)

-0.575

Length

529 amino acids

Sequence
(BLAST)

001: MNNQAKNIAA SSLFGHSGMA PQKHHPNPIQ QWNHPNPLLS QSQSHPQTQF PGPFQFSDPQ NQVFAKAQYS QAHLHSPAAL AHPQPQTHPF AHLHSVNTNT
101: ANGTSSPATG SAKRATPKPP LRSHNSLNTN QSMPFKATEL TPAARQKKQT PEKVAALLPE SALYTQLLDF EAQVDAALAR RKIDVQEAKL PPHVQKTLRV
201: YVFNTFSNHA KMDAENRKAD ESWWSLKITG RILEDGMDSV SGTSQGSSPS YPKFSAFFKK ITILLDQSLY PNNHVIVWDS ARSPTEQDGF EVKRKGNKEF
301: TALIAIEMNY TPDKFMVSSP LSKLLGIEVE TRSRIIATLF NYVKSRKLQS PNDPSFFICD PSLQMVFGEE KMDFTMVSQK LSQHLSQPRP IHLEHNIKLS
401: GHSPAVSACY DIQVDVPFPL EKDMSTFLAG FESQKEIEAY DEAICGSLKK IQEHRRRRAF FLSFSQYPAE FIDTLISSES KDLKLVAGDA SHNVEKELRS
501: EFFNQPWVED AVIRYLNRKT AGSDAHGRN

Best Arabidopsis Sequence Match ( AT3G01890.1 )
(BLAST)

001: MSGNNELNAL KGPQSSLPWP FGMASASFAP SHMAPPNFQP QFQLSQDQGI SAPGRRFPHK PPIGGPPAVP PSMELTPASR KKKHKLPDKS SLQERVAAVL
101: PESALYTQLL EFESRVDAAL FRKKVDIQDS LKNPPSIQKT LRIYVFNTFS NQIPGPDPPT WTLRIFGRVL DPDHTGGLVQ NSNPLYPKFS SFFKTLKISL
201: DQSLYPENHL IEWKRDRSPA PLEGFEIKRI GCQEFAATIL LEMNYVPEKF KTSPALMQVL GIEVDTRPRI IAAIWHYVKV RKLQNPNDPS FFNCDAALHS
301: VFGEEKMKFT MLSHKISQHL SPPPPIQLVH KIKLSGNNPA ISACYDVLVD IPAPVQTELS NLLANPEKNK EIEACDEAIC GAIRKIHEHR RRRAFFLGFS
401: QSPVEFTNAL MESQTKDLKL VAGEASRNAE KEGRSEFFNQ PWVEDAAIRY LNRKPAGG

Arabidopsis Description

At3g01890 [Source:UniProtKB/TrEMBL;Acc:Q147F4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.