Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0382100-01 | Rice | nucleus | 49.13 | 65.03 |
| AT5G14170.1 | Thale cress | plastid | 75.55 | 64.79 |
| Zm00001d045433_P001 | Maize | plastid | 32.1 | 59.76 |
| KRG94254 | Soybean | nucleus | 70.09 | 59.12 |
| VIT_14s0068g02140.t01 | Wine grape | plastid | 70.52 | 58.94 |
| KRH57679 | Soybean | nucleus | 69.87 | 58.93 |
| KRG94519 | Soybean | nucleus | 58.3 | 55.86 |
| GSMUA_Achr9P01520_001 | Banana | plastid | 59.61 | 55.38 |
| TraesCS2D01G280300.1 | Wheat | plastid | 63.1 | 55.15 |
| TraesCS2B01G298800.1 | Wheat | plastid | 63.1 | 55.05 |
| TraesCS2A01G281500.1 | Wheat | nucleus | 63.1 | 54.94 |
| GSMUA_Achr6P20740_001 | Banana | plastid | 61.35 | 54.35 |
| KXG36804 | Sorghum | plastid | 63.1 | 54.32 |
| Solyc02g068100.2.1 | Tomato | nucleus | 64.41 | 54.23 |
| KRH06950 | Soybean | plastid | 46.07 | 53.96 |
| Zm00001d022322_P001 | Maize | plastid | 62.45 | 53.76 |
| Zm00001d007039_P001 | Maize | plastid | 62.23 | 53.57 |
| HORVU2Hr1G068970.1 | Barley | cytosol | 59.39 | 52.51 |
| PGSC0003DMT400017831 | Potato | nucleus, plastid | 62.01 | 49.74 |
Protein Annotations
| Gene3D:1.10.245.10 | MapMan:12.4.2.2 | EntrezGene:820093 | ProteinID:AEE73730.1 | ArrayExpress:AT3G01890 | EnsemblPlantsGene:AT3G01890 |
| RefSeq:AT3G01890 | TAIR:AT3G01890 | RefSeq:AT3G01890-TAIR-G | EnsemblPlants:AT3G01890.1 | TAIR:AT3G01890.1 | Unigene:At.45849 |
| EMBL:BT026139 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 | InterPro:IPR036885 | RefSeq:NP_566154.2 |
| PFAM:PF02201 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0025022 | PANTHER:PTHR13844 | PANTHER:PTHR13844:SF22 |
| UniProt:Q147F4 | SMART:SM00151 | SUPFAM:SSF47592 | InterPro:SWIB_MDM2_dom_sf | InterPro:SWIB_MDM2_domain | InterPro:SWIB_domain |
| UniParc:UPI0000196AC1 | SEG:seg | : | : | : | : |
Description
At3g01890 [Source:UniProtKB/TrEMBL;Acc:Q147F4]
Coordinates
chr3:+:310007..312073
Molecular Weight (calculated)
51331.7 Da
IEP (calculated)
9.554
GRAVY (calculated)
-0.434
Length
458 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGNNELNAL KGPQSSLPWP FGMASASFAP SHMAPPNFQP QFQLSQDQGI SAPGRRFPHK PPIGGPPAVP PSMELTPASR KKKHKLPDKS SLQERVAAVL
101: PESALYTQLL EFESRVDAAL FRKKVDIQDS LKNPPSIQKT LRIYVFNTFS NQIPGPDPPT WTLRIFGRVL DPDHTGGLVQ NSNPLYPKFS SFFKTLKISL
201: DQSLYPENHL IEWKRDRSPA PLEGFEIKRI GCQEFAATIL LEMNYVPEKF KTSPALMQVL GIEVDTRPRI IAAIWHYVKV RKLQNPNDPS FFNCDAALHS
301: VFGEEKMKFT MLSHKISQHL SPPPPIQLVH KIKLSGNNPA ISACYDVLVD IPAPVQTELS NLLANPEKNK EIEACDEAIC GAIRKIHEHR RRRAFFLGFS
401: QSPVEFTNAL MESQTKDLKL VAGEASRNAE KEGRSEFFNQ PWVEDAAIRY LNRKPAGG
101: PESALYTQLL EFESRVDAAL FRKKVDIQDS LKNPPSIQKT LRIYVFNTFS NQIPGPDPPT WTLRIFGRVL DPDHTGGLVQ NSNPLYPKFS SFFKTLKISL
201: DQSLYPENHL IEWKRDRSPA PLEGFEIKRI GCQEFAATIL LEMNYVPEKF KTSPALMQVL GIEVDTRPRI IAAIWHYVKV RKLQNPNDPS FFNCDAALHS
301: VFGEEKMKFT MLSHKISQHL SPPPPIQLVH KIKLSGNNPA ISACYDVLVD IPAPVQTELS NLLANPEKNK EIEACDEAIC GAIRKIHEHR RRRAFFLGFS
401: QSPVEFTNAL MESQTKDLKL VAGEASRNAE KEGRSEFFNQ PWVEDAAIRY LNRKPAGG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.