CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH40974
KRH57887
KRH59626
KRH63972

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14810.1	KRH40974	AT5G63610.1	20706207
AT1G14810.1	KRH57887	AT5G63610.1	20706207
AT1G14810.1	KRH59626	AT5G63610.1	20706207
AT1G14810.1	KRH63972	AT5G63610.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60442	Soybean	nucleus	94.46	95.21
GSMUA_Achr10P...	Banana	cytosol	76.52	83.81
VIT_01s0011g05860.t01	Wine grape	plastid	82.85	82.85
Solyc01g005250.2.1	Tomato	plastid	79.95	79.53
PGSC0003DMT400058680	Potato	plastid	79.95	78.29
EER93410	Sorghum	mitochondrion	73.88	74.67
GSMUA_Achr6P11140_001	Banana	cytosol	57.52	73.9
Os03t0760700-01	Rice	plastid	72.3	73.07
TraesCS5A01G398300.1	Wheat	plastid	71.77	72.73
Bra016680.1-P	Field mustard	cytosol	65.96	72.67
TraesCS5B01G403400.1	Wheat	plastid	70.71	71.66
TraesCS5D01G407800.1	Wheat	plastid	70.18	71.12
CDX84002	Canola	plastid	69.66	70.4
CDY52027	Canola	plastid	69.66	70.4
HORVU5Hr1G097020.5	Barley	plastid	69.13	70.05
CDY45291	Canola	plastid	69.13	69.87
Bra026186.1-P	Field mustard	plastid	68.87	69.6
AT1G14810.1	Thale cress	plastid	68.87	69.6
CDY51765	Canola	plastid	68.6	69.33
CDY26323	Canola	extracellular	16.62	64.29
Bra037900.1-P	Field mustard	vacuole	17.41	43.71

Protein Annotations

KEGG:00220+1.2.1.38	KEGG:00260+1.2.1.11	KEGG:00261+1.2.1.11	KEGG:00270+1.2.1.11	KEGG:00300+1.2.1.11	EntrezGene:100814757
Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:4.1.2.2.2	EMBL:ACUP02004778	InterPro:Asp_semialdehyde_DH	InterPro:Asp_semialdehyde_DH_beta
EnsemblPlantsGene:GLYMA_08G047800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003942	GO:GO:0004073
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009086	GO:GO:0009088
GO:GO:0009089	GO:GO:0009097	GO:GO:0009987	GO:GO:0016620	GO:GO:0046983	GO:GO:0050661
GO:GO:0051287	GO:GO:0055114	UniProt:I1KQD8	EnsemblPlants:KRH41742	ProteinID:KRH41742	ProteinID:KRH41742.1
HAMAP:MF_02121	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01118	PFAM:PF02774	PIRSF:PIRSF000148	PANTHER:PTHR10174
PANTHER:PTHR10174:SF2	MetaCyc:PWY-2941	MetaCyc:PWY-2942	MetaCyc:PWY-5097	MetaCyc:PWY-5154	MetaCyc:PWY-6559
MetaCyc:PWY-6562	MetaCyc:PWY-7153	MetaCyc:PWY-7400	SMART:SM00859	SUPFAM:SSF51735	SUPFAM:SSF55347
InterPro:Semialdehyde_DH_NAD-bd	InterPro:Semialdhyde_DH_dimer_dom	TIGRFAMs:TIGR01296	UniParc:UPI000295DFBF	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:+:3722632..3725368

Molecular Weight (calculated)

41391.7 Da

IEP (calculated)

6.788

GRAVY (calculated)

-0.174

Length

379 amino acids

Sequence
(BLAST)

001: MMMSSLSVSR HNHLFSGPLP ARPKPKPSFS SSRIRMSLQE NGPSIAVVGV TGAVGQEFLS VLSDRDFPYS SIKMLASKRS AGRRITFEDR DYVVEELTAE
101: SFDGVDIALF SAGGSISKYF GPIAVDRGTV VVDNSSAFRM DENVPLVIPE VNPEAMQNIK AGTGKGALIA NPNCSTIICL MAATPLHRRA KVLRMVVSTY
201: QAASGAGAAA MEELQLQTRE VLEGKPPTCK IFNRQYAFNL FSHNASVLSN GYNEEEMKMV KETRKIWNNK DVKVTATCIR VPVMRAHAES VNLQFETPLD
301: EDTARDILKN APGVVVIDDR ESNHFPTPLE VSNKDDVAVG RIRQDLSQDG NQGLDIFVCG DQIRKGAALN AIQIAEMLL

Best Arabidopsis Sequence Match ( AT1G14810.1 )
(BLAST)

001: MATFTHQTPQ THFLSRLPLR AKPRHFSARV KMSLQESAPS LAVVGVTGAV GQEFLSVLSD RDFPYSSIKM LASKRSAGKR VAFDGHEYTV EELTADSFNG
101: VDIALFSAGG SISKEFGPLA AEKGTIVVDN SSAFRMVDGV PLVIPEVNPE AMKGIKVGMG KGALIANPNC STIICLMAVT PLHHHAKVKR MVVSTYQAAS
201: GAGAAAMEEL VQQTREVLEG KPPTCNIFGQ QYAFNLFSHN APILDNGYNE EEMKLVKETR KIWNDTEVKV TATCIRVPVM RAHAESVNLQ FENPLDENTA
301: REILKKAPGV YIIDDRASNT FPTPLDVSNK DDVAVGRIRR DVSQDGNFGL DIFVCGDQIR KGAALNAVQI AEMLL

Arabidopsis Description

Aspartate-semialdehyde dehydrogenase, putative [Source:UniProtKB/TrEMBL;Acc:Q8VYI4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.