Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra037748.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G14810.1 | Bra037748.1-P | AT5G63610.1 | 20706207 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52027 | Canola | plastid | 98.84 | 90.67 |
| CDX84002 | Canola | plastid | 97.67 | 89.6 |
| Bra026186.1-P | Field mustard | plastid | 95.06 | 87.2 |
| AT1G14810.1 | Thale cress | plastid | 94.77 | 86.93 |
| GSMUA_Achr10P... | Banana | cytosol | 71.51 | 71.1 |
| Solyc01g005250.2.1 | Tomato | plastid | 73.55 | 66.4 |
| KRH41742 | Soybean | plastid | 72.67 | 65.96 |
| VIT_01s0011g05860.t01 | Wine grape | plastid | 72.38 | 65.7 |
| PGSC0003DMT400058680 | Potato | plastid | 73.84 | 65.63 |
| KRH60442 | Soybean | nucleus | 70.64 | 64.63 |
| EER93410 | Sorghum | mitochondrion | 67.73 | 62.13 |
| TraesCS5A01G398300.1 | Wheat | plastid | 67.44 | 62.03 |
| Os03t0760700-01 | Rice | plastid | 67.44 | 61.87 |
| TraesCS5B01G403400.1 | Wheat | plastid | 66.86 | 61.5 |
| TraesCS5D01G407800.1 | Wheat | plastid | 66.57 | 61.23 |
| HORVU5Hr1G097020.5 | Barley | plastid | 65.41 | 60.16 |
| GSMUA_Achr6P11140_001 | Banana | cytosol | 51.45 | 60.0 |
| Bra037900.1-P | Field mustard | vacuole | 21.8 | 49.67 |
Protein Annotations
| KEGG:00220+1.2.1.38 | KEGG:00260+1.2.1.11 | KEGG:00261+1.2.1.11 | KEGG:00270+1.2.1.11 | KEGG:00300+1.2.1.11 | Gene3D:3.30.360.10 |
| Gene3D:3.40.50.720 | MapMan:4.1.2.2.2 | InterPro:Asp_semialdehyde_DH | InterPro:Asp_semialdehyde_DH_beta | EnsemblPlantsGene:Bra016680 | EnsemblPlants:Bra016680.1 |
| EnsemblPlants:Bra016680.1-P | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003942 | GO:GO:0004073 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 | GO:GO:0009086 | GO:GO:0009088 |
| GO:GO:0009089 | GO:GO:0009097 | GO:GO:0009987 | GO:GO:0016620 | GO:GO:0046983 | GO:GO:0050661 |
| GO:GO:0051287 | GO:GO:0055114 | UniProt:M4DJK2 | HAMAP:MF_02121 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01118 |
| PFAM:PF02774 | PIRSF:PIRSF000148 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF2 | SMART:SM00859 | SUPFAM:SSF51735 |
| SUPFAM:SSF55347 | InterPro:Semialdehyde_DH_NAD-bd | InterPro:Semialdhyde_DH_dimer_dom | TIGRFAMs:TIGR01296 | UniParc:UPI0002545A88 | SEG:seg |
Description
AT1G14810 (E=4e-182) | semialdehyde dehydrogenase family protein
Coordinates
chrA08:+:19534373..19536167
Molecular Weight (calculated)
37217.5 Da
IEP (calculated)
5.478
GRAVY (calculated)
-0.106
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLQESAPSL AVVGVTGAVG QEFLSVLSDR DFPYSSVKML ASKRSAGKRV AFDGREYTVE ELTADSFEGV DIALFSTGGS ISKEFGPRAA ERGTIVVDNS
101: SAFRMVDGVS LVIPEVNPEA MKGIKVGTGK GALIANPNCS TIICLMAVTP LHHHAKVKRM VVSTYQAASG AGAAAMEELV QQTREVLAGK PPTCNIFSQQ
201: YAFNLFSHNA PITENGYNEE EMKLVKETRK IWNDTEVKVT ATCIRVPVMR AHAESVNLQF ENPLDENTAR ELLRKAPGVY IIDDRASNTF PTPLDVSNKD
301: DVAVGRIRRD VSQDGNFGLD IFVCGDQIRK GAALNAVQIT EMLL
101: SAFRMVDGVS LVIPEVNPEA MKGIKVGTGK GALIANPNCS TIICLMAVTP LHHHAKVKRM VVSTYQAASG AGAAAMEELV QQTREVLAGK PPTCNIFSQQ
201: YAFNLFSHNA PITENGYNEE EMKLVKETRK IWNDTEVKVT ATCIRVPVMR AHAESVNLQF ENPLDENTAR ELLRKAPGVY IIDDRASNTF PTPLDVSNKD
301: DVAVGRIRRD VSQDGNFGLD IFVCGDQIRK GAALNAVQIT EMLL
001: MATFTHQTPQ THFLSRLPLR AKPRHFSARV KMSLQESAPS LAVVGVTGAV GQEFLSVLSD RDFPYSSIKM LASKRSAGKR VAFDGHEYTV EELTADSFNG
101: VDIALFSAGG SISKEFGPLA AEKGTIVVDN SSAFRMVDGV PLVIPEVNPE AMKGIKVGMG KGALIANPNC STIICLMAVT PLHHHAKVKR MVVSTYQAAS
201: GAGAAAMEEL VQQTREVLEG KPPTCNIFGQ QYAFNLFSHN APILDNGYNE EEMKLVKETR KIWNDTEVKV TATCIRVPVM RAHAESVNLQ FENPLDENTA
301: REILKKAPGV YIIDDRASNT FPTPLDVSNK DDVAVGRIRR DVSQDGNFGL DIFVCGDQIR KGAALNAVQI AEMLL
101: VDIALFSAGG SISKEFGPLA AEKGTIVVDN SSAFRMVDGV PLVIPEVNPE AMKGIKVGMG KGALIANPNC STIICLMAVT PLHHHAKVKR MVVSTYQAAS
201: GAGAAAMEEL VQQTREVLEG KPPTCNIFGQ QYAFNLFSHN APILDNGYNE EEMKLVKETR KIWNDTEVKV TATCIRVPVM RAHAESVNLQ FENPLDENTA
301: REILKKAPGV YIIDDRASNT FPTPLDVSNK DDVAVGRIRR DVSQDGNFGL DIFVCGDQIR KGAALNAVQI AEMLL
Arabidopsis Description
Aspartate-semialdehyde dehydrogenase, putative [Source:UniProtKB/TrEMBL;Acc:Q8VYI4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.