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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g005250.2.1 Tomato plastid 95.61 97.11
GSMUA_Achr10P... Banana cytosol 73.13 81.79
VIT_01s0011g05860.t01 Wine grape plastid 79.07 80.74
KRH41742 Soybean plastid 78.29 79.95
KRH60442 Soybean nucleus 77.26 79.52
EER93410 Sorghum mitochondrion 71.58 73.87
Bra016680.1-P Field mustard cytosol 65.63 73.84
TraesCS5A01G398300.1 Wheat plastid 71.32 73.8
Os03t0760700-01 Rice plastid 71.06 73.33
TraesCS5B01G403400.1 Wheat plastid 70.8 73.26
TraesCS5D01G407800.1 Wheat plastid 70.28 72.73
GSMUA_Achr6P11140_001 Banana cytosol 54.78 71.86
HORVU5Hr1G097020.5 Barley plastid 69.25 71.66
AT1G14810.1 Thale cress plastid 68.73 70.93
Bra026186.1-P Field mustard plastid 67.7 69.87
CDY52027 Canola plastid 67.7 69.87
CDY45291 Canola plastid 67.7 69.87
CDX84002 Canola plastid 67.44 69.6
CDY51765 Canola plastid 67.18 69.33
CDY26323 Canola extracellular 17.05 67.35
Bra037900.1-P Field mustard vacuole 18.35 47.02
Protein Annotations
KEGG:00220+1.2.1.38KEGG:00260+1.2.1.11KEGG:00261+1.2.1.11KEGG:00270+1.2.1.11KEGG:00300+1.2.1.11EntrezGene:102596301
Gene3D:3.30.360.10Gene3D:3.40.50.720MapMan:4.1.2.2.2InterPro:Asp_semialdehyde_DHInterPro:Asp_semialdehyde_DH_betaGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0003942GO:GO:0004073GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0008150
GO:GO:0008152GO:GO:0008652GO:GO:0009058GO:GO:0009086GO:GO:0009088GO:GO:0009089
GO:GO:0009097GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009987GO:GO:0016620
GO:GO:0046983GO:GO:0050661GO:GO:0051287GO:GO:0055114UniProt:M1C340HAMAP:MF_02121
InterPro:NAD(P)-bd_dom_sfPFAM:PF01118PFAM:PF02774EnsemblPlantsGene:PGSC0003DMG400022796PGSC:PGSC0003DMG400022796EnsemblPlants:PGSC0003DMT400058680
PIRSF:PIRSF000148PANTHER:PTHR10174PANTHER:PTHR10174:SF2SMART:SM00859SUPFAM:SSF51735SUPFAM:SSF55347
InterPro:Semialdehyde_DH_NAD-bdInterPro:Semialdhyde_DH_dimer_domTIGRFAMs:TIGR01296UniParc:UPI00029608B2RefSeq:XP_006364049.1SEG:seg
Description
Aspartate-semialdehyde dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400022796]
Coordinates
chr1:-:477018..481530
Molecular Weight (calculated)
42014.2 Da
IEP (calculated)
7.503
GRAVY (calculated)
-0.198
Length
387 amino acids
Sequence
(BLAST)
001: MNSPALSLRH NHFLNGGSAL ASGIRLPRSI SSSSTSSSPF RVRMSLQENG PSVAVVGVTG AVGQEFLSVL SDRNFPYRSI KLLASKRSAG KSMKFEERDY
101: TVEELTEDSF DGIDIALFSA GGSISKKFGP LAAQKGTIVV DNSSAFRMDE NVPLVIPEVN PEAMAHVKLG SGKGALIANP NCSTIICLMA VTPLHRRAKV
201: KRMVVSTYQA ASGAGAAAME ELVQQTREVL EGKEPTCNIF NQQYAFNLFS HNAPIQPNGY NEEEMKLVKE TRKIWSDKDV KVTATCIRVP VMRAHAESVN
301: LQFENPLDEN TARDILKNAP GIVVVDDRAS NRFPTPLEVS NKDDVAVGRV RRDVSQDGDY GLDIFVCGDQ IRKGAALNAV QIAEMLL
Best Arabidopsis Sequence Match ( AT1G14810.1 )
(BLAST)
001: MATFTHQTPQ THFLSRLPLR AKPRHFSARV KMSLQESAPS LAVVGVTGAV GQEFLSVLSD RDFPYSSIKM LASKRSAGKR VAFDGHEYTV EELTADSFNG
101: VDIALFSAGG SISKEFGPLA AEKGTIVVDN SSAFRMVDGV PLVIPEVNPE AMKGIKVGMG KGALIANPNC STIICLMAVT PLHHHAKVKR MVVSTYQAAS
201: GAGAAAMEEL VQQTREVLEG KPPTCNIFGQ QYAFNLFSHN APILDNGYNE EEMKLVKETR KIWNDTEVKV TATCIRVPVM RAHAESVNLQ FENPLDENTA
301: REILKKAPGV YIIDDRASNT FPTPLDVSNK DDVAVGRIRR DVSQDGNFGL DIFVCGDQIR KGAALNAVQI AEMLL
Arabidopsis Description
Aspartate-semialdehyde dehydrogenase, putative [Source:UniProtKB/TrEMBL;Acc:Q8VYI4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.