Factsheet for Bra026186.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra037748.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14810.1	Bra037748.1-P	AT5G63610.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45291	Canola	plastid	99.2	99.2
Bra016680.1-P	Field mustard	cytosol	87.2	95.06
AT1G14810.1	Thale cress	plastid	92.27	92.27
GSMUA_Achr10P...	Banana	cytosol	65.87	71.39
KRH41742	Soybean	plastid	69.6	68.87
Solyc01g005250.2.1	Tomato	plastid	69.87	68.77
KRH60442	Soybean	nucleus	68.27	68.09
PGSC0003DMT400058680	Potato	plastid	69.87	67.7
VIT_01s0011g05860.t01	Wine grape	plastid	66.67	65.96
Os03t0760700-01	Rice	plastid	63.73	63.73
TraesCS5A01G398300.1	Wheat	plastid	63.2	63.37
EER93410	Sorghum	mitochondrion	63.2	63.2
TraesCS5B01G403400.1	Wheat	plastid	62.4	62.57
TraesCS5D01G407800.1	Wheat	plastid	62.13	62.3
HORVU5Hr1G097020.5	Barley	plastid	61.33	61.5
GSMUA_Achr6P11140_001	Banana	cytosol	47.47	60.34
Bra037900.1-P	Field mustard	vacuole	19.73	49.01

Protein Annotations

KEGG:00220+1.2.1.38	KEGG:00260+1.2.1.11	KEGG:00261+1.2.1.11	KEGG:00270+1.2.1.11	KEGG:00300+1.2.1.11	Gene3D:3.30.360.10
Gene3D:3.40.50.720	MapMan:4.1.2.2.2	InterPro:Asp_semialdehyde_DH	InterPro:Asp_semialdehyde_DH_beta	EnsemblPlantsGene:Bra026186	EnsemblPlants:Bra026186.1
EnsemblPlants:Bra026186.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003942	GO:GO:0004073
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009086	GO:GO:0009088
GO:GO:0009089	GO:GO:0009097	GO:GO:0009987	GO:GO:0016620	GO:GO:0046983	GO:GO:0050661
GO:GO:0051287	GO:GO:0055114	UniProt:M4EBM7	HAMAP:MF_02121	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01118
PFAM:PF02774	PIRSF:PIRSF000148	PANTHER:PTHR10174	PANTHER:PTHR10174:SF2	SMART:SM00859	SUPFAM:SSF51735
SUPFAM:SSF55347	InterPro:Semialdehyde_DH_NAD-bd	InterPro:Semialdhyde_DH_dimer_dom	TIGRFAMs:TIGR01296	UniParc:UPI000253EFAD	SEG:seg

Description

AT1G14810 (E=1e-196) | semialdehyde dehydrogenase family protein

Coordinates

chrA06:-:5690463..5692344

Molecular Weight (calculated)

40560.7 Da

IEP (calculated)

7.912

GRAVY (calculated)

-0.099

Length

375 amino acids

Sequence
(BLAST)

001: MATLTHQTPQ THFLSNLPLK PKPRAISARV KMSLHESAPS LAVVGVTGAV GQEFLSVLSD RDFPYSSVKM LASKRSAGKR VAFDGREYTV EELTAESFNG
101: VDIALFSAGG SISKAFGPLA AERGTIVVDN SSAFRMVDGV PLVIPEVNPE AMRGIKVGSG KGALIANPNC STIICLMAVT PLHRHAKVKR MVVSTYQAAS
201: GAGAAAMEEL VQQTREVLAG RPPTCNIFGQ QYAFNLFSHN APITENGYNE EEVKLVKETR KIWNDTEVKV TATCIRVPVM RAHAESVNLQ FENPLDENTA
301: RELLKKAPGV YIIDDRASNT FPTPLDVSNK DDVAVGRIRR DVSQDGNYGL DIFVCGDQIR KGAALNAVQI AEMLF

Best Arabidopsis Sequence Match ( AT1G14810.1 )
(BLAST)

001: MATFTHQTPQ THFLSRLPLR AKPRHFSARV KMSLQESAPS LAVVGVTGAV GQEFLSVLSD RDFPYSSIKM LASKRSAGKR VAFDGHEYTV EELTADSFNG
101: VDIALFSAGG SISKEFGPLA AEKGTIVVDN SSAFRMVDGV PLVIPEVNPE AMKGIKVGMG KGALIANPNC STIICLMAVT PLHHHAKVKR MVVSTYQAAS
201: GAGAAAMEEL VQQTREVLEG KPPTCNIFGQ QYAFNLFSHN APILDNGYNE EEMKLVKETR KIWNDTEVKV TATCIRVPVM RAHAESVNLQ FENPLDENTA
301: REILKKAPGV YIIDDRASNT FPTPLDVSNK DDVAVGRIRR DVSQDGNFGL DIFVCGDQIR KGAALNAVQI AEMLL

Arabidopsis Description

Aspartate-semialdehyde dehydrogenase, putative [Source:UniProtKB/TrEMBL;Acc:Q8VYI4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.