Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr11P... | |
| GSMUA_Achr5P18030_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G14810.1 | GSMUA_Achr11P... | AT5G63610.1 | 20706207 |
| AT1G14810.1 | GSMUA_Achr5P18030_001 | AT5G63610.1 | 20706207 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 84.41 | 71.97 |
| CDY26323 | Canola | extracellular | 19.32 | 58.16 |
| KRH60442 | Soybean | nucleus | 73.9 | 57.98 |
| KRH41742 | Soybean | plastid | 73.9 | 57.52 |
| EER93410 | Sorghum | mitochondrion | 72.54 | 57.07 |
| Os03t0760700-01 | Rice | plastid | 72.2 | 56.8 |
| VIT_01s0011g05860.t01 | Wine grape | plastid | 72.88 | 56.73 |
| Solyc01g005250.2.1 | Tomato | plastid | 72.2 | 55.91 |
| PGSC0003DMT400058680 | Potato | plastid | 71.86 | 54.78 |
| TraesCS5A01G398300.1 | Wheat | plastid | 68.47 | 54.01 |
| TraesCS5B01G403400.1 | Wheat | plastid | 68.47 | 54.01 |
| TraesCS5D01G407800.1 | Wheat | plastid | 68.47 | 54.01 |
| HORVU5Hr1G097020.5 | Barley | plastid | 67.12 | 52.94 |
| Bra016680.1-P | Field mustard | cytosol | 60.0 | 51.45 |
| CDY45291 | Canola | plastid | 60.34 | 47.47 |
| Bra026186.1-P | Field mustard | plastid | 60.34 | 47.47 |
| AT1G14810.1 | Thale cress | plastid | 60.34 | 47.47 |
| CDY52027 | Canola | plastid | 60.0 | 47.2 |
| CDX84002 | Canola | plastid | 60.0 | 47.2 |
| CDY51765 | Canola | plastid | 59.66 | 46.93 |
| Bra037900.1-P | Field mustard | vacuole | 20.0 | 39.07 |
Protein Annotations
| KEGG:00220+1.2.1.38 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | MapMan:4.1.2.2.2 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003942 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016620 | GO:GO:0046983 | GO:GO:0051287 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr6G11140_001 |
| EnsemblPlants:GSMUA_Achr6P11140_001 | EnsemblPlants:GSMUA_Achr6T11140_001 | UniProt:M0T613 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01118 | PFAM:PF02774 |
| PIRSF:PIRSF000148 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF2 | SMART:SM00859 | SUPFAM:SSF51735 | SUPFAM:SSF55347 |
| InterPro:Semialdehyde_DH_NAD-bd | InterPro:Semialdhyde_DH_dimer_dom | UniParc:UPI000294D822 | SEG:seg | : | : |
Description
Aspartate-semialdehyde dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr6G11140_001]
Coordinates
chr6:+:7419244..7423345
Molecular Weight (calculated)
32677.2 Da
IEP (calculated)
7.689
GRAVY (calculated)
-0.228
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLREDGPSV AVVGVTGAVG QEFLRVFSDR DFPYRNIRLL ASRRSTGKRL TFEDRENPEA MAHIKLQGRS GKGALIANPN CSTIVCLMAA TPLHRHAKVV
101: RMVVSTYQAA SGAGTAVMEE PMQQTHEVFF FNASKSHFVQ YALNLFSHNA AVFSNGYNEE EMKLVKETRK FWNDMDVKVT ATCIRVPVMH AHAENVNLQI
201: EKPLGEDTAR RILEGAAGVV VVDDRESNHF PTPLDVSNKD DVAVGRIHQD LSQDGNLGFT KIEYHVLIKL DIFVCGDQIR KGAARKAIQI AENLS
101: RMVVSTYQAA SGAGTAVMEE PMQQTHEVFF FNASKSHFVQ YALNLFSHNA AVFSNGYNEE EMKLVKETRK FWNDMDVKVT ATCIRVPVMH AHAENVNLQI
201: EKPLGEDTAR RILEGAAGVV VVDDRESNHF PTPLDVSNKD DVAVGRIHQD LSQDGNLGFT KIEYHVLIKL DIFVCGDQIR KGAARKAIQI AENLS
001: MATFTHQTPQ THFLSRLPLR AKPRHFSARV KMSLQESAPS LAVVGVTGAV GQEFLSVLSD RDFPYSSIKM LASKRSAGKR VAFDGHEYTV EELTADSFNG
101: VDIALFSAGG SISKEFGPLA AEKGTIVVDN SSAFRMVDGV PLVIPEVNPE AMKGIKVGMG KGALIANPNC STIICLMAVT PLHHHAKVKR MVVSTYQAAS
201: GAGAAAMEEL VQQTREVLEG KPPTCNIFGQ QYAFNLFSHN APILDNGYNE EEMKLVKETR KIWNDTEVKV TATCIRVPVM RAHAESVNLQ FENPLDENTA
301: REILKKAPGV YIIDDRASNT FPTPLDVSNK DDVAVGRIRR DVSQDGNFGL DIFVCGDQIR KGAALNAVQI AEMLL
101: VDIALFSAGG SISKEFGPLA AEKGTIVVDN SSAFRMVDGV PLVIPEVNPE AMKGIKVGMG KGALIANPNC STIICLMAVT PLHHHAKVKR MVVSTYQAAS
201: GAGAAAMEEL VQQTREVLEG KPPTCNIFGQ QYAFNLFSHN APILDNGYNE EEMKLVKETR KIWNDTEVKV TATCIRVPVM RAHAESVNLQ FENPLDENTA
301: REILKKAPGV YIIDDRASNT FPTPLDVSNK DDVAVGRIRR DVSQDGNFGL DIFVCGDQIR KGAALNAVQI AEMLL
Arabidopsis Description
Aspartate-semialdehyde dehydrogenase, putative [Source:UniProtKB/TrEMBL;Acc:Q8VYI4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.