Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr11P... | |
| GSMUA_Achr5P18030_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G14810.1 | GSMUA_Achr11P... | AT5G63610.1 | 20706207 |
| AT1G14810.1 | GSMUA_Achr5P18030_001 | AT5G63610.1 | 20706207 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P11140_001 | Banana | cytosol | 71.97 | 84.41 |
| KRH60442 | Soybean | nucleus | 83.81 | 77.13 |
| VIT_01s0011g05860.t01 | Wine grape | plastid | 84.39 | 77.04 |
| KRH41742 | Soybean | plastid | 83.81 | 76.52 |
| EER93410 | Sorghum | mitochondrion | 80.92 | 74.67 |
| Solyc01g005250.2.1 | Tomato | plastid | 82.08 | 74.54 |
| Os03t0760700-01 | Rice | plastid | 80.06 | 73.87 |
| PGSC0003DMT400058680 | Potato | plastid | 81.79 | 73.13 |
| Bra016680.1-P | Field mustard | cytosol | 71.1 | 71.51 |
| TraesCS5D01G407800.1 | Wheat | plastid | 76.59 | 70.86 |
| TraesCS5B01G403400.1 | Wheat | plastid | 76.59 | 70.86 |
| TraesCS5A01G398300.1 | Wheat | plastid | 76.59 | 70.86 |
| HORVU5Hr1G097020.5 | Barley | plastid | 75.43 | 69.79 |
| CDY26323 | Canola | extracellular | 18.79 | 66.33 |
| CDX84002 | Canola | plastid | 71.68 | 66.13 |
| CDY52027 | Canola | plastid | 71.68 | 66.13 |
| Bra026186.1-P | Field mustard | plastid | 71.39 | 65.87 |
| CDY45291 | Canola | plastid | 71.39 | 65.87 |
| AT1G14810.1 | Thale cress | plastid | 71.39 | 65.87 |
| CDY51765 | Canola | plastid | 70.52 | 65.07 |
| Bra037900.1-P | Field mustard | vacuole | 19.08 | 43.71 |
Protein Annotations
| KEGG:00220+1.2.1.38 | KEGG:00260+1.2.1.11 | KEGG:00261+1.2.1.11 | KEGG:00270+1.2.1.11 | KEGG:00300+1.2.1.11 | Gene3D:3.30.360.10 |
| Gene3D:3.40.50.720 | MapMan:4.1.2.2.2 | InterPro:Asp_semialdehyde_DH | InterPro:Asp_semialdehyde_DH_beta | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003942 | GO:GO:0004073 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 |
| GO:GO:0009058 | GO:GO:0009086 | GO:GO:0009088 | GO:GO:0009089 | GO:GO:0009097 | GO:GO:0009987 |
| GO:GO:0016620 | GO:GO:0046983 | GO:GO:0050661 | GO:GO:0051287 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr10G18110_001 |
| EnsemblPlants:GSMUA_Achr10P18110_001 | EnsemblPlants:GSMUA_Achr10T18110_001 | UniProt:M0RJ86 | HAMAP:MF_02121 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01118 |
| PFAM:PF02774 | PIRSF:PIRSF000148 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF2 | SMART:SM00859 | SUPFAM:SSF51735 |
| SUPFAM:SSF55347 | InterPro:Semialdehyde_DH_NAD-bd | InterPro:Semialdhyde_DH_dimer_dom | TIGRFAMs:TIGR01296 | UniParc:UPI000295A7A3 | SEG:seg |
Description
Aspartate-semialdehyde dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr10G18110_001]
Coordinates
chr10:-:24998590..25002499
Molecular Weight (calculated)
37774.4 Da
IEP (calculated)
5.944
GRAVY (calculated)
-0.122
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLREDGPSV AVVGVTGAVG QEFLRVLSDR NFPYRNIRLL ASRRSAGKRL TFEDREYTIE ELRPESFEGI DIALFSAGGS ISKEFGPVAV ERGSIVVDNS
101: SAFRMVPEVP LVIPEVNPEA MAHIKLKGRS GKGALIANPN CSTIICLMAA TPLHRHAKVV RMVVSTYQAA SGAGAAAMEE LLQQTHEVLD GKQPTCKIFN
201: QQYAFNLFSH NAAVLSNGYN EEEMKLVKET RKIWNDMDVK VTATCIRVPV MRAHAESVNL QFEKPLDEDT ARCILEGAAG VAVIDDRESN HFPTPLDVSN
301: KDDVAVGRIR QDLSQDGNLG LDIFVCGDQI RKGAALNAIQ IAEKLL
101: SAFRMVPEVP LVIPEVNPEA MAHIKLKGRS GKGALIANPN CSTIICLMAA TPLHRHAKVV RMVVSTYQAA SGAGAAAMEE LLQQTHEVLD GKQPTCKIFN
201: QQYAFNLFSH NAAVLSNGYN EEEMKLVKET RKIWNDMDVK VTATCIRVPV MRAHAESVNL QFEKPLDEDT ARCILEGAAG VAVIDDRESN HFPTPLDVSN
301: KDDVAVGRIR QDLSQDGNLG LDIFVCGDQI RKGAALNAIQ IAEKLL
001: MATFTHQTPQ THFLSRLPLR AKPRHFSARV KMSLQESAPS LAVVGVTGAV GQEFLSVLSD RDFPYSSIKM LASKRSAGKR VAFDGHEYTV EELTADSFNG
101: VDIALFSAGG SISKEFGPLA AEKGTIVVDN SSAFRMVDGV PLVIPEVNPE AMKGIKVGMG KGALIANPNC STIICLMAVT PLHHHAKVKR MVVSTYQAAS
201: GAGAAAMEEL VQQTREVLEG KPPTCNIFGQ QYAFNLFSHN APILDNGYNE EEMKLVKETR KIWNDTEVKV TATCIRVPVM RAHAESVNLQ FENPLDENTA
301: REILKKAPGV YIIDDRASNT FPTPLDVSNK DDVAVGRIRR DVSQDGNFGL DIFVCGDQIR KGAALNAVQI AEMLL
101: VDIALFSAGG SISKEFGPLA AEKGTIVVDN SSAFRMVDGV PLVIPEVNPE AMKGIKVGMG KGALIANPNC STIICLMAVT PLHHHAKVKR MVVSTYQAAS
201: GAGAAAMEEL VQQTREVLEG KPPTCNIFGQ QYAFNLFSHN APILDNGYNE EEMKLVKETR KIWNDTEVKV TATCIRVPVM RAHAESVNLQ FENPLDENTA
301: REILKKAPGV YIIDDRASNT FPTPLDVSNK DDVAVGRIRR DVSQDGNFGL DIFVCGDQIR KGAALNAVQI AEMLL
Arabidopsis Description
Aspartate-semialdehyde dehydrogenase, putative [Source:UniProtKB/TrEMBL;Acc:Q8VYI4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.