Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRH39044 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G14465.1 | KRH39044 | AT3G17860.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31728 | Soybean | cytosol | 92.54 | 91.85 |
| VIT_05s0049g00100.t01 | Wine grape | cytosol | 72.76 | 75.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.27 | 74.25 |
| GSMUA_Achr11P... | Banana | cytosol | 47.01 | 73.26 |
| GSMUA_Achr2P04080_001 | Banana | cytosol | 63.43 | 72.34 |
| KRH34516 | Soybean | cytosol, nucleus, peroxisome | 77.99 | 72.07 |
| Os08t0563200-01 | Rice | cytosol | 60.07 | 68.51 |
| KRG92293 | Soybean | cytosol, mitochondrion, nucleus | 77.24 | 68.32 |
| TraesCS4B01G001100.1 | Wheat | cytosol, nucleus, peroxisome | 63.06 | 67.6 |
| Zm00001d018508_P001 | Maize | cytosol | 61.57 | 67.35 |
| Os02t0820800-00 | Rice | cytosol, nucleus, peroxisome | 65.67 | 66.17 |
| Solyc09g089620.1.1 | Tomato | nucleus | 69.4 | 65.03 |
| GSMUA_Achr5P19550_001 | Banana | cytosol | 64.93 | 64.44 |
| PGSC0003DMT400044451 | Potato | nucleus | 67.91 | 63.86 |
| Zm00001d049906_P001 | Maize | nucleus | 62.31 | 63.02 |
| KXG25365 | Sorghum | nucleus | 63.06 | 62.59 |
| Zm00001d031887_P001 | Maize | nucleus | 62.31 | 62.08 |
| KRG92616 | Soybean | nucleus | 62.69 | 60.65 |
| KRH34163 | Soybean | nucleus | 62.31 | 59.64 |
| TraesCS6A01G399200.1 | Wheat | cytosol, extracellular, peroxisome | 64.18 | 59.31 |
| TraesCS6D01G383400.1 | Wheat | cytosol, extracellular, peroxisome | 64.18 | 59.31 |
| TraesCS4D01G001800.1 | Wheat | nucleus | 63.06 | 59.3 |
| TraesCS4A01G312400.1 | Wheat | nucleus | 63.06 | 59.3 |
| HORVU6Hr1G091740.1 | Barley | cytosol | 64.55 | 59.25 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 61.57 | 59.14 |
| TraesCS6B01G439500.1 | Wheat | cytosol, extracellular, peroxisome | 64.55 | 59.04 |
| HORVU4Hr1G000870.2 | Barley | nucleus | 62.69 | 58.54 |
| TraesCS6B01G072300.1 | Wheat | nucleus | 61.57 | 58.51 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 61.57 | 58.51 |
| HORVU6Hr1G010470.2 | Barley | cytosol, nucleus, peroxisome | 61.19 | 58.36 |
| Os07t0235200-01 | Rice | endoplasmic reticulum, extracellular | 41.04 | 58.2 |
| TraesCS6A01G053800.1 | Wheat | nucleus | 61.19 | 58.16 |
| TraesCS6D01G055500.1 | Wheat | cytosol | 60.82 | 57.8 |
| AT4G14465.1 | Thale cress | cytosol, nucleus, plastid | 60.45 | 57.65 |
| OQU85972 | Sorghum | cytosol | 63.81 | 57.58 |
| KRH51551 | Soybean | plastid | 41.42 | 54.41 |
| KRH28289 | Soybean | cytosol | 50.37 | 54.0 |
| KRH77205 | Soybean | nucleus | 50.0 | 53.6 |
| KRH73062 | Soybean | cytosol | 45.15 | 52.84 |
| KRH00993 | Soybean | nucleus | 52.24 | 52.24 |
| KRH40225 | Soybean | nucleus | 51.49 | 51.11 |
| KRH57320 | Soybean | nucleus | 53.36 | 50.53 |
| KRH31005 | Soybean | nucleus | 53.73 | 49.83 |
| KRH76289 | Soybean | nucleus | 53.36 | 49.65 |
| KRH04051 | Soybean | nucleus | 52.99 | 49.48 |
| KRH14482 | Soybean | cytosol, mitochondrion, peroxisome | 45.9 | 49.4 |
| KRH15076 | Soybean | nucleus | 31.72 | 48.85 |
| KRH73632 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 44.78 | 48.39 |
| KRH04340 | Soybean | cytosol | 45.15 | 48.21 |
| KRH58197 | Soybean | cytosol | 49.25 | 47.83 |
| KRG97871 | Soybean | nucleus | 53.36 | 47.35 |
| KRH28008 | Soybean | nucleus | 52.61 | 47.32 |
| KRH77431 | Soybean | nucleus | 52.24 | 46.67 |
| KRH65251 | Soybean | nucleus | 52.24 | 45.16 |
| KRH72453 | Soybean | nucleus | 39.55 | 39.11 |
| KRH62181 | Soybean | nucleus | 40.3 | 38.57 |
| KRH52892 | Soybean | nucleus | 40.67 | 38.38 |
| KRH16838 | Soybean | nucleus | 36.57 | 38.28 |
| HORVU0Hr1G011700.1 | Barley | cytosol | 29.48 | 36.57 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EMBL:ACUP02012606 | InterPro:AT-hook_nuclear | EnsemblPlantsGene:GLYMA_20G087200 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005175 | UniProt:K7N2D7 |
| EnsemblPlants:KRG90376 | ProteinID:KRG90376 | ProteinID:KRG90376.1 | PFAM:PF03479 | PIRSF:PIRSF016021 | InterPro:PPC_dom |
| PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF42 | SUPFAM:SSF117856 | UniParc:UPI0002961317 | SEG:seg |
Description
hypothetical protein
Coordinates
chr20:-:32630905..32633144
Molecular Weight (calculated)
27413.0 Da
IEP (calculated)
5.576
GRAVY (calculated)
-0.415
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSINERSL VRERQEEDEE DERDNGDEPK EGAVEVGTRR PRGRPPGSKN KPKPPIFVTR DSPNSLRSHV MEVAGGADVA ESVAQFARRR QRGVCVLSGS
101: GAVANVTLRQ PSAPGAVVAL HGRFEILSLT GTFLPGPAPP GATGLTVYLG GGQGQVVGGS VVGSLVAAGP VMVIAATFAN ATYERLPLEE EEDDGGASAH
201: GGSTLGGSPP GMGNSGGNGD NSGGGHLSSG GIPDPSSLAL YNLPPNLIPN GGHHEAFAWA HGHGRPPY
101: GAVANVTLRQ PSAPGAVVAL HGRFEILSLT GTFLPGPAPP GATGLTVYLG GGQGQVVGGS VVGSLVAAGP VMVIAATFAN ATYERLPLEE EEDDGGASAH
201: GGSTLGGSPP GMGNSGGNGD NSGGGHLSSG GIPDPSSLAL YNLPPNLIPN GGHHEAFAWA HGHGRPPY
001: MANPWWTNQS GLAGMVDHSV SSGHHQNHHH QSLLTKGDLG IAMNQSQDND QDEEDDPREG AVEVVNRRPR GRPPGSKNKP KAPIFVTRDS PNALRSHVLE
101: ISDGSDVADT IAHFSRRRQR GVCVLSGTGS VANVTLRQAA APGGVVSLQG RFEILSLTGA FLPGPSPPGS TGLTVYLAGV QGQVVGGSVV GPLLAIGSVM
201: VIAATFSNAT YERLPMEEEE DGGGSRQIHG GGDSPPRIGS NLPDLSGMAG PGYNMPPHLI PNGAGQLGHE PYTWVHARPP Y
101: ISDGSDVADT IAHFSRRRQR GVCVLSGTGS VANVTLRQAA APGGVVSLQG RFEILSLTGA FLPGPSPPGS TGLTVYLAGV QGQVVGGSVV GPLLAIGSVM
201: VIAATFSNAT YERLPMEEEE DGGGSRQIHG GGDSPPRIGS NLPDLSGMAG PGYNMPPHLI PNGAGQLGHE PYTWVHARPP Y
Arabidopsis Description
AHL20AT-hook motif nuclear-localized protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWQ2]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.