Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
- peroxisome 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G42940.1 | KRH03466 | AT3G47620.1 | 21798944 |
| AT2G42940.1 | KRH54542 | AT3G47620.1 | 21798944 |
| AT2G42940.1 | KRH56919 | AT3G47620.1 | 21798944 |
| AT2G42940.1 | KRH63357 | AT3G47620.1 | 21798944 |
| AT2G42940.1 | KRH51422 | AT4G38800.1 | 21798944 |
| AT2G42940.1 | KRH51427 | AT4G38800.1 | 21798944 |
| AT2G42940.1 | KRH60729 | AT4G38800.1 | 21798944 |
| AT2G42940.1 | KRH60733 | AT4G38800.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14482 | Soybean | cytosol, mitochondrion, peroxisome | 96.77 | 96.39 |
| VIT_12s0028g00070.t01 | Wine grape | cytoskeleton, cytosol, plastid | 78.63 | 72.76 |
| PGSC0003DMT400044573 | Potato | cytosol | 66.94 | 66.14 |
| Solyc07g056300.1.1 | Tomato | cytosol, nucleus, peroxisome | 66.53 | 65.74 |
| AT2G42940.1 | Thale cress | plastid | 67.34 | 64.98 |
| Bra004732.1-P | Field mustard | plastid | 66.53 | 63.22 |
| CDX79838 | Canola | plastid | 66.13 | 63.08 |
| Bra000281.1-P | Field mustard | plastid | 66.13 | 62.84 |
| CDY53650 | Canola | plastid | 65.73 | 62.69 |
| CDY14862 | Canola | plastid | 64.11 | 60.92 |
| Bra016853.1-P | Field mustard | plastid | 63.71 | 60.54 |
| CDY70947 | Canola | plastid | 63.71 | 60.54 |
| KRH28289 | Soybean | cytosol | 47.98 | 47.6 |
| KRH77205 | Soybean | nucleus | 47.98 | 47.6 |
| KRH51551 | Soybean | plastid | 39.11 | 47.55 |
| KRH57320 | Soybean | nucleus | 53.63 | 47.0 |
| KRH28008 | Soybean | nucleus | 56.45 | 46.98 |
| KRH04051 | Soybean | nucleus | 53.63 | 46.34 |
| KRH77431 | Soybean | nucleus | 56.05 | 46.33 |
| KRH31728 | Soybean | cytosol | 49.19 | 45.19 |
| KRG90376 | Soybean | nucleus | 48.39 | 44.78 |
| KRH76289 | Soybean | nucleus | 51.61 | 44.44 |
| KRH00993 | Soybean | nucleus | 47.18 | 43.66 |
| KRH40225 | Soybean | nucleus | 46.77 | 42.96 |
| KRH73062 | Soybean | cytosol | 38.71 | 41.92 |
| KRH04340 | Soybean | cytosol | 42.34 | 41.83 |
| KRH58197 | Soybean | cytosol | 45.97 | 41.3 |
| KRH65251 | Soybean | nucleus | 50.81 | 40.65 |
| KRH15076 | Soybean | nucleus | 28.23 | 40.23 |
| KRG92616 | Soybean | nucleus | 44.76 | 40.07 |
| KRH34516 | Soybean | cytosol, nucleus, peroxisome | 46.77 | 40.0 |
| KRH34163 | Soybean | nucleus | 43.55 | 38.57 |
| KRH31005 | Soybean | nucleus | 44.35 | 38.06 |
| KRG92293 | Soybean | cytosol, mitochondrion, nucleus | 45.97 | 37.62 |
| KRG97871 | Soybean | nucleus | 45.16 | 37.09 |
| KRH16838 | Soybean | nucleus | 32.26 | 31.25 |
| KRH52892 | Soybean | nucleus | 35.48 | 30.99 |
| KRH62181 | Soybean | nucleus | 34.68 | 30.71 |
| KRH72453 | Soybean | nucleus | 33.47 | 30.63 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EMBL:ACUP02001286 | InterPro:AT-hook_nuclear | EnsemblPlantsGene:GLYMA_02G285500 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005175 | UniProt:K7KBC5 |
| EnsemblPlants:KRH73632 | ProteinID:KRH73632 | ProteinID:KRH73632.1 | PFAM:PF03479 | PIRSF:PIRSF016021 | InterPro:PPC_dom |
| PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF17 | SUPFAM:SSF117856 | TMHMM:TMhelix | UniParc:UPI0002336E0D |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:46650504..46652113
Molecular Weight (calculated)
26210.5 Da
IEP (calculated)
8.827
GRAVY (calculated)
-0.182
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRKQEQDKG NSNMSGTDVA LISPKVPKAV SPVSSAAEGD TLRRPRGRPA GSKNKPKPPI IVTRDSANAL KAHAMEVSSG CDVNESLSNF ARRKQRGLYI
101: FNGTGCVTNV TLCQPGSSGA IVTLHGRFEI LSLLGSILPP PAPPGITGLT IYLAGAQGQV VGGAVVGALI ASGPLVIMAA SFMHATFDRL PLEDDELAAA
201: MQNQHYQNGR THHLDISDLY AMPQNLLMNG TMPPEIYSWA PGQNLSKT
101: FNGTGCVTNV TLCQPGSSGA IVTLHGRFEI LSLLGSILPP PAPPGITGLT IYLAGAQGQV VGGAVVGALI ASGPLVIMAA SFMHATFDRL PLEDDELAAA
201: MQNQHYQNGR THHLDISDLY AMPQNLLMNG TMPPEIYSWA PGQNLSKT
001: MAGGTALTPT SVGSKSVPMR NHEATERGNT NNNLRALPKA VQPVSSIEGE MAKRPRGRPA GSKNKPKPPI IVTHDSPNSL RANAVEISSG CDICETLSDF
101: ARRKQRGLCI LSANGCVTNV TLRQPASSGA IVTLHGRYEI LSLLGSILPP PAPLGITGLT IYLAGPQGQV VGGGVVGGLI ASGPVVLMAA SFMNAVFDRL
201: PMDDDEAASM QNQQYYQNGR SRPLDDIHGL PQNLLTNGNS ASDIYSWGPA QRVMSKP
101: ARRKQRGLCI LSANGCVTNV TLRQPASSGA IVTLHGRYEI LSLLGSILPP PAPLGITGLT IYLAGPQGQV VGGGVVGGLI ASGPVVLMAA SFMNAVFDRL
201: PMDDDEAASM QNQQYYQNGR SRPLDDIHGL PQNLLTNGNS ASDIYSWGPA QRVMSKP
Arabidopsis Description
AHL16AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VQG3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.