Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH65251 | Soybean | nucleus | 92.36 | 85.81 |
| VIT_15s0048g00780.t01 | Wine grape | nucleus | 71.18 | 68.33 |
| KRH57320 | Soybean | nucleus | 62.5 | 63.6 |
| Solyc01g091470.2.1 | Tomato | nucleus | 65.28 | 62.25 |
| KRH04051 | Soybean | nucleus | 61.81 | 62.02 |
| PGSC0003DMT400033248 | Potato | nucleus | 65.97 | 61.69 |
| CDY18931 | Canola | nucleus | 65.62 | 61.16 |
| Bra039338.1-P | Field mustard | nucleus | 64.58 | 60.39 |
| CDX74739 | Canola | nucleus | 64.93 | 60.32 |
| AT2G45430.1 | Thale cress | nucleus | 66.32 | 60.25 |
| Bra004911.1-P | Field mustard | nucleus | 64.24 | 60.06 |
| CDY37040 | Canola | nucleus | 64.24 | 60.06 |
| AT3G60870.1 | Thale cress | nucleus | 55.21 | 60.0 |
| CDY27387 | Canola | nucleus | 64.93 | 59.94 |
| KRH77431 | Soybean | nucleus | 62.15 | 59.67 |
| KRH28008 | Soybean | nucleus | 61.11 | 59.06 |
| KRH28289 | Soybean | cytosol | 50.0 | 57.6 |
| KRH77205 | Soybean | nucleus | 49.65 | 57.2 |
| GSMUA_Achr1P19850_001 | Banana | nucleus | 60.42 | 56.68 |
| KRH31728 | Soybean | cytosol | 50.69 | 54.07 |
| KRH51551 | Soybean | plastid | 37.85 | 53.43 |
| KRG90376 | Soybean | nucleus | 49.65 | 53.36 |
| KRH14482 | Soybean | cytosol, mitochondrion, peroxisome | 45.49 | 52.61 |
| KRH00993 | Soybean | nucleus | 48.26 | 51.87 |
| KRH73632 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 44.44 | 51.61 |
| KRH40225 | Soybean | nucleus | 47.92 | 51.11 |
| KRG92616 | Soybean | nucleus | 48.96 | 50.9 |
| KRH34163 | Soybean | nucleus | 49.31 | 50.71 |
| KRH04340 | Soybean | cytosol | 44.1 | 50.6 |
| KRH58197 | Soybean | cytosol | 47.92 | 50.0 |
| KRH73062 | Soybean | cytosol | 39.24 | 49.34 |
| KRH34516 | Soybean | cytosol, nucleus, peroxisome | 49.65 | 49.31 |
| KRH15076 | Soybean | nucleus | 28.82 | 47.7 |
| KRH31005 | Soybean | nucleus | 46.88 | 46.71 |
| KRG92293 | Soybean | cytosol, mitochondrion, nucleus | 48.61 | 46.2 |
| KRG97871 | Soybean | nucleus | 46.88 | 44.7 |
| GSMUA_Achr3P11300_001 | Banana | nucleus | 32.29 | 40.61 |
| KRH52892 | Soybean | nucleus | 37.15 | 37.68 |
| KRH62181 | Soybean | nucleus | 36.46 | 37.5 |
| KRH16838 | Soybean | nucleus | 30.9 | 34.77 |
| KRH72453 | Soybean | nucleus | 32.64 | 34.69 |
Protein Annotations
| EntrezGene:100792957 | Gene3D:3.30.1330.80 | MapMan:35.1 | EMBL:ACUP02000600 | InterPro:AT-hook_nuclear | EnsemblPlantsGene:GLYMA_01G144400 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1J7Y6 |
| InterPro:IPR005175 | EnsemblPlants:KRH76289 | ProteinID:KRH76289 | ProteinID:KRH76289.1 | PFAM:PF03479 | PIRSF:PIRSF016021 |
| InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF2 | SUPFAM:SSF117856 | UniParc:UPI00023370AD |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:47862147..47864577
Molecular Weight (calculated)
29583.8 Da
IEP (calculated)
7.743
GRAVY (calculated)
-0.468
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIIPHHQFQ PHHNHQNTED EAGNGRGQKR DRDENAGGGG GATTPPQGGG EGKESGSGDG GGSDMGRRPR GRPAGSKNKP KPPIIITRDS ANALRSHVME
101: IANGCDIMES ITAFARRRQR GVCVLSGSGT VTNVTLRQPA SPGAVVTLHG RFEILSLSGS FLPPPAPPAA SGLAIYLAGG QGQVVGGSVV GPLVASGPVV
201: IMAASFGNAA YERLPLEEEE TPVAVAGNGG LGSPGIPGTQ QQPQQQQQQQ LVGDPNSSSL FHGMPQNLLN SVQLPAEGYW GGSARPPF
101: IANGCDIMES ITAFARRRQR GVCVLSGSGT VTNVTLRQPA SPGAVVTLHG RFEILSLSGS FLPPPAPPAA SGLAIYLAGG QGQVVGGSVV GPLVASGPVV
201: IMAASFGNAA YERLPLEEEE TPVAVAGNGG LGSPGIPGTQ QQPQQQQQQQ LVGDPNSSSL FHGMPQNLLN SVQLPAEGYW GGSARPPF
001: MDQVSRSLPP PFLSRDLHLH PHHQFQHQQQ QQQQNHGHDI DQHRIGGLKR DRDADIDPNE HSSAGKDQST PGSGGESGGG GGGDNHITRR PRGRPAGSKN
101: KPKPPIIITR DSANALKSHV MEVANGCDVM ESVTVFARRR QRGICVLSGN GAVTNVTIRQ PASVPGGGSS VVNLHGRFEI LSLSGSFLPP PAPPAASGLT
201: IYLAGGQGQV VGGSVVGPLM ASGPVVIMAA SFGNAAYERL PLEEDDQEEQ TAGAVANNID GNATMGGGTQ TQTQTQQQQQ QQLMQDPTSF IQGLPPNLMN
301: SVQLPAEAYW GTPRPSF
101: KPKPPIIITR DSANALKSHV MEVANGCDVM ESVTVFARRR QRGICVLSGN GAVTNVTIRQ PASVPGGGSS VVNLHGRFEI LSLSGSFLPP PAPPAASGLT
201: IYLAGGQGQV VGGSVVGPLM ASGPVVIMAA SFGNAAYERL PLEEDDQEEQ TAGAVANNID GNATMGGGTQ TQTQTQQQQQ QQLMQDPTSF IQGLPPNLMN
301: SVQLPAEAYW GTPRPSF
Arabidopsis Description
AHL22AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VXD2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.