Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76289 | Soybean | nucleus | 85.81 | 92.36 |
| VIT_15s0048g00780.t01 | Wine grape | nucleus | 71.61 | 74.0 |
| KRH57320 | Soybean | nucleus | 62.58 | 68.55 |
| KRH04051 | Soybean | nucleus | 62.58 | 67.6 |
| Solyc01g091470.2.1 | Tomato | nucleus | 63.87 | 65.56 |
| PGSC0003DMT400033248 | Potato | nucleus | 64.84 | 65.26 |
| Bra039338.1-P | Field mustard | nucleus | 64.52 | 64.94 |
| AT2G45430.1 | Thale cress | nucleus | 66.13 | 64.67 |
| CDY37040 | Canola | nucleus | 64.19 | 64.61 |
| CDY27387 | Canola | nucleus | 64.84 | 64.42 |
| CDY18931 | Canola | nucleus | 63.87 | 64.08 |
| KRH28008 | Soybean | nucleus | 61.29 | 63.76 |
| CDX74739 | Canola | nucleus | 63.55 | 63.55 |
| KRH77431 | Soybean | nucleus | 61.29 | 63.33 |
| Bra004911.1-P | Field mustard | nucleus | 62.9 | 63.31 |
| AT3G60870.1 | Thale cress | nucleus | 52.58 | 61.51 |
| GSMUA_Achr1P19850_001 | Banana | nucleus | 58.71 | 59.28 |
| KRH28289 | Soybean | cytosol | 47.42 | 58.8 |
| KRH77205 | Soybean | nucleus | 46.45 | 57.6 |
| KRH04340 | Soybean | cytosol | 43.55 | 53.78 |
| KRH00993 | Soybean | nucleus | 46.45 | 53.73 |
| KRH40225 | Soybean | nucleus | 46.13 | 52.96 |
| KRH31728 | Soybean | cytosol | 45.81 | 52.59 |
| KRG90376 | Soybean | nucleus | 45.16 | 52.24 |
| KRH14482 | Soybean | cytosol, mitochondrion, peroxisome | 41.94 | 52.21 |
| KRH58197 | Soybean | cytosol | 46.45 | 52.17 |
| KRH51551 | Soybean | plastid | 33.87 | 51.47 |
| KRG92616 | Soybean | nucleus | 45.48 | 50.9 |
| KRH73632 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 40.65 | 50.81 |
| KRH34163 | Soybean | nucleus | 45.81 | 50.71 |
| KRH34516 | Soybean | cytosol, nucleus, peroxisome | 46.77 | 50.0 |
| KRH73062 | Soybean | cytosol | 35.48 | 48.03 |
| KRG92293 | Soybean | cytosol, mitochondrion, nucleus | 45.81 | 46.86 |
| GSMUA_Achr3P11300_001 | Banana | nucleus | 34.19 | 46.29 |
| KRH31005 | Soybean | nucleus | 42.9 | 46.02 |
| KRH15076 | Soybean | nucleus | 25.81 | 45.98 |
| KRG97871 | Soybean | nucleus | 42.26 | 43.38 |
| KRH52892 | Soybean | nucleus | 33.87 | 36.97 |
| KRH62181 | Soybean | nucleus | 33.23 | 36.79 |
| KRH16838 | Soybean | nucleus | 28.06 | 33.98 |
| KRH72453 | Soybean | nucleus | 29.68 | 33.95 |
Protein Annotations
| EntrezGene:100816243 | Gene3D:3.30.1330.80 | MapMan:35.1 | EMBL:ACUP02001318 | InterPro:AT-hook_nuclear | EnsemblPlantsGene:GLYMA_03G022700 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1JKK6 |
| InterPro:IPR005175 | EnsemblPlants:KRH65251 | ProteinID:KRH65251 | ProteinID:KRH65251.1 | PFAM:PF03479 | PIRSF:PIRSF016021 |
| InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF2 | SUPFAM:SSF117856 | UniParc:UPI0002339D70 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:2358393..2360007
Molecular Weight (calculated)
32360.0 Da
IEP (calculated)
7.128
GRAVY (calculated)
-0.557
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPVAAQGRP LPPPFLTRDL HLHPHHQFQP HHNNQNTEDE AGNGRGQKRD RDENVGGGGG ATTPPHGGGE GKEPGSEDGG GSDMGRRPRG RPAGSKNKPK
101: PPIIITRDSA NALRSHVMEI TNGCDIMESV TAFARRRQRG ICLLSGSGTV TNVTLRQPAS PSAVVTLHGR FEILSLSGSF LPPPAPPAAS GLAIYLAGGQ
201: GQVVGGSVVG PLVASGPVVI MAASFGNAAY ERLPLEEEET PVPYHGTEGL GSPGIPGTQQ QSQSQPQQQQ QQLVGDPNSS SLFHGVPQNL LNSIQLPAEG
301: YWGGSARPPF
101: PPIIITRDSA NALRSHVMEI TNGCDIMESV TAFARRRQRG ICLLSGSGTV TNVTLRQPAS PSAVVTLHGR FEILSLSGSF LPPPAPPAAS GLAIYLAGGQ
201: GQVVGGSVVG PLVASGPVVI MAASFGNAAY ERLPLEEEET PVPYHGTEGL GSPGIPGTQQ QSQSQPQQQQ QQLVGDPNSS SLFHGVPQNL LNSIQLPAEG
301: YWGGSARPPF
001: MDQVSRSLPP PFLSRDLHLH PHHQFQHQQQ QQQQNHGHDI DQHRIGGLKR DRDADIDPNE HSSAGKDQST PGSGGESGGG GGGDNHITRR PRGRPAGSKN
101: KPKPPIIITR DSANALKSHV MEVANGCDVM ESVTVFARRR QRGICVLSGN GAVTNVTIRQ PASVPGGGSS VVNLHGRFEI LSLSGSFLPP PAPPAASGLT
201: IYLAGGQGQV VGGSVVGPLM ASGPVVIMAA SFGNAAYERL PLEEDDQEEQ TAGAVANNID GNATMGGGTQ TQTQTQQQQQ QQLMQDPTSF IQGLPPNLMN
301: SVQLPAEAYW GTPRPSF
101: KPKPPIIITR DSANALKSHV MEVANGCDVM ESVTVFARRR QRGICVLSGN GAVTNVTIRQ PASVPGGGSS VVNLHGRFEI LSLSGSFLPP PAPPAASGLT
201: IYLAGGQGQV VGGSVVGPLM ASGPVVIMAA SFGNAAYERL PLEEDDQEEQ TAGAVANNID GNATMGGGTQ TQTQTQQQQQ QQLMQDPTSF IQGLPPNLMN
301: SVQLPAEAYW GTPRPSF
Arabidopsis Description
AHL22AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VXD2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.