Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77431 | Soybean | nucleus | 93.29 | 92.67 |
| KRH57320 | Soybean | nucleus | 79.87 | 84.1 |
| KRH04051 | Soybean | nucleus | 79.53 | 82.58 |
| VIT_02s0025g05100.t01 | Wine grape | nucleus | 78.19 | 77.15 |
| Solyc06g060500.1.1 | Tomato | nucleus | 54.7 | 74.09 |
| PGSC0003DMT400045315 | Potato | nucleus | 54.7 | 73.76 |
| PGSC0003DMT400010004 | Potato | nucleus | 69.13 | 70.31 |
| Solyc08g079720.2.1 | Tomato | nucleus | 68.79 | 70.21 |
| PGSC0003DMT400032509 | Potato | nucleus | 68.46 | 65.59 |
| Solyc08g007560.1.1 | Tomato | nucleus | 69.8 | 65.2 |
| KRH65251 | Soybean | nucleus | 63.76 | 61.29 |
| KRH76289 | Soybean | nucleus | 59.06 | 61.11 |
| KRH28289 | Soybean | cytosol | 49.66 | 59.2 |
| KRH77205 | Soybean | nucleus | 48.99 | 58.4 |
| TraesCS6D01G167600.1 | Wheat | nucleus | 59.73 | 57.61 |
| TraesCS6B01G209300.1 | Wheat | nucleus | 59.4 | 57.28 |
| HORVU6Hr1G037640.1 | Barley | nucleus | 59.4 | 57.28 |
| HORVU6Hr1G037630.1 | Barley | nucleus | 59.4 | 57.28 |
| TraesCS6A01G176200.1 | Wheat | nucleus | 59.06 | 56.96 |
| Os02t0448000-00 | Rice | nucleus | 60.07 | 56.65 |
| Zm00001d016132_P001 | Maize | nucleus | 58.72 | 56.63 |
| KRH73632 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 46.98 | 56.45 |
| KRH14482 | Soybean | cytosol, mitochondrion, peroxisome | 46.98 | 56.22 |
| Zm00001d053429_P001 | Maize | nucleus | 59.4 | 55.31 |
| EES04848 | Sorghum | nucleus | 59.4 | 54.13 |
| KRH31728 | Soybean | cytosol | 48.99 | 54.07 |
| KRH00993 | Soybean | nucleus | 47.65 | 52.99 |
| KRG90376 | Soybean | nucleus | 47.32 | 52.61 |
| KRH40225 | Soybean | nucleus | 46.98 | 51.85 |
| KRH04340 | Soybean | cytosol | 43.62 | 51.79 |
| KRH51551 | Soybean | plastid | 34.9 | 50.98 |
| KRH58197 | Soybean | cytosol | 46.31 | 50.0 |
| KRG92616 | Soybean | nucleus | 44.3 | 47.65 |
| KRH15076 | Soybean | nucleus | 27.52 | 47.13 |
| KRH34516 | Soybean | cytosol, nucleus, peroxisome | 45.64 | 46.9 |
| KRH34163 | Soybean | nucleus | 43.29 | 46.07 |
| KRH73062 | Soybean | cytosol | 35.23 | 45.85 |
| KRG92293 | Soybean | cytosol, mitochondrion, nucleus | 45.3 | 44.55 |
| KRH31005 | Soybean | nucleus | 42.28 | 43.6 |
| KRG97871 | Soybean | nucleus | 42.62 | 42.05 |
| KRH62181 | Soybean | nucleus | 34.56 | 36.79 |
| KRH52892 | Soybean | nucleus | 34.9 | 36.62 |
| KRH16838 | Soybean | nucleus | 30.54 | 35.55 |
| KRH72453 | Soybean | nucleus | 32.21 | 35.42 |
Protein Annotations
| EntrezGene:100802044 | Gene3D:3.30.1330.80 | MapMan:35.1 | EMBL:ACUP02006738 | InterPro:AT-hook_nuclear | EnsemblPlantsGene:GLYMA_11G028800 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1LGK4 |
| InterPro:IPR005175 | ProteinID:KRH28007.1 | EnsemblPlants:KRH28008 | ProteinID:KRH28008 | ProteinID:KRH28008.1 | PFAM:PF03479 |
| PIRSF:PIRSF016021 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF15 | SUPFAM:SSF117856 |
| UniParc:UPI000233C9CE | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:2073771..2076640
Molecular Weight (calculated)
31036.5 Da
IEP (calculated)
6.845
GRAVY (calculated)
-0.376
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPITAHGHS LPPPFHTARD LHLHHQQQQH QFHSLQEDEQ SGSSGGLNLA AHKREREENN NSDGKEGGAG SAETEISRRP RGRPAGSKNK PKPPIIITRD
101: SANALKTHVM EVADGCDIVE SVSAFARRRQ RGVCIMSGTG TVTNVTLRQP ASSGAVVTLH GRFEILSLAG SFLPPPAPPE ASGLTIYLAG GQGQVVGGSV
201: VGALIASGPV VIMSASFSNA AYERLPLEDE EPSIGLQGGG SIGSPGGGGG VGQSQAPHQL MGDSTTAPLF HGLNPNLLNS VQMPSTETFW ATGRSPYC
101: SANALKTHVM EVADGCDIVE SVSAFARRRQ RGVCIMSGTG TVTNVTLRQP ASSGAVVTLH GRFEILSLAG SFLPPPAPPE ASGLTIYLAG GQGQVVGGSV
201: VGALIASGPV VIMSASFSNA AYERLPLEDE EPSIGLQGGG SIGSPGGGGG VGQSQAPHQL MGDSTTAPLF HGLNPNLLNS VQMPSTETFW ATGRSPYC
001: MDPVQSHGSQ SSLPPPFHAR DFQLHLQQQQ QEFFLHHHQQ QRNQTDGDQQ GGSGGNRQIK MDREETSDNI DNIANNSGSE GKDIDIHGGS GEGGGGSGGD
101: HQMTRRPRGR PAGSKNKPKP PIIITRDSAN ALRTHVMEIG DGCDLVESVA TFARRRQRGV CVMSGTGNVT NVTIRQPGSH PSPGSVVSLH GRFEILSLSG
201: SFLPPPAPPT ATGLSVYLAG GQGQVVGGSV VGPLLCAGPV VVMAASFSNA AYERLPLEED EMQTPVHGGG GGGSLESPPM MGQQLQHQQQ AMSGHQGLPP
301: NLLGSVQLQQ QHDQSYWSTG RPPY
101: HQMTRRPRGR PAGSKNKPKP PIIITRDSAN ALRTHVMEIG DGCDLVESVA TFARRRQRGV CVMSGTGNVT NVTIRQPGSH PSPGSVVSLH GRFEILSLSG
201: SFLPPPAPPT ATGLSVYLAG GQGQVVGGSV VGPLLCAGPV VVMAASFSNA AYERLPLEED EMQTPVHGGG GGGSLESPPM MGQQLQHQQQ AMSGHQGLPP
301: NLLGSVQLQQ QHDQSYWSTG RPPY
Arabidopsis Description
AHL24AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178V625]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.