Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62181 | Soybean | nucleus | 94.72 | 96.07 |
| KRH72453 | Soybean | nucleus | 64.44 | 67.53 |
| CDX83182 | Canola | cytosol | 57.39 | 66.53 |
| CDY21451 | Canola | cytosol | 57.39 | 66.53 |
| Bra000593.1-P | Field mustard | cytosol | 60.56 | 65.4 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 54.23 | 62.86 |
| AT5G49700.1 | Thale cress | nucleus | 59.86 | 61.59 |
| KRH16838 | Soybean | nucleus | 55.28 | 61.33 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 57.39 | 60.59 |
| AT1G14490.2 | Thale cress | plastid | 47.54 | 60.0 |
| Bra026211.1-P | Field mustard | plastid | 41.55 | 57.56 |
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 37.68 | 57.53 |
| CDY45266 | Canola | plastid | 41.2 | 57.07 |
| Solyc04g076220.2.1 | Tomato | nucleus | 62.68 | 52.98 |
| Solyc12g087950.1.1 | Tomato | nucleus | 48.94 | 52.26 |
| PGSC0003DMT400005182 | Potato | nucleus | 48.59 | 51.49 |
| GSMUA_Achr10P... | Banana | nucleus | 47.89 | 48.75 |
| CDY65376 | Canola | nucleus | 46.83 | 48.36 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 34.86 | 48.29 |
| KRH28289 | Soybean | cytosol | 38.73 | 44.0 |
| KRH77205 | Soybean | nucleus | 38.38 | 43.6 |
| KRH04340 | Soybean | cytosol | 36.97 | 41.83 |
| KRH00993 | Soybean | nucleus | 39.08 | 41.42 |
| KRH40225 | Soybean | nucleus | 39.08 | 41.11 |
| Os09t0464300-00 | Rice | nucleus | 48.24 | 41.02 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 32.75 | 40.97 |
| KRG90376 | Soybean | nucleus | 38.38 | 40.67 |
| KRH31728 | Soybean | cytosol | 38.38 | 40.37 |
| KRH15076 | Soybean | nucleus | 24.65 | 40.23 |
| KRH73062 | Soybean | cytosol | 32.39 | 40.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.83 | 39.7 |
| KRH51551 | Soybean | plastid | 28.17 | 39.22 |
| TraesCS5D01G252500.1 | Wheat | cytosol | 45.77 | 38.81 |
| TraesCS5B01G243200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 45.77 | 38.69 |
| Zm00001d020768_P001 | Maize | cytosol | 45.07 | 38.44 |
| KRH58197 | Soybean | cytosol | 36.97 | 38.04 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 45.42 | 37.94 |
| KRH76289 | Soybean | nucleus | 37.68 | 37.15 |
| KRH57320 | Soybean | nucleus | 36.97 | 37.1 |
| KRH31005 | Soybean | nucleus | 37.68 | 37.02 |
| Zm00001d005923_P001 | Maize | nucleus | 44.72 | 36.92 |
| KRH04051 | Soybean | nucleus | 36.97 | 36.59 |
| KRH14482 | Soybean | cytosol, mitochondrion, peroxisome | 32.04 | 36.55 |
| KRH34163 | Soybean | nucleus | 35.92 | 36.43 |
| KRH34516 | Soybean | cytosol, nucleus, peroxisome | 36.97 | 36.21 |
| KRG92616 | Soybean | nucleus | 34.86 | 35.74 |
| KRH73632 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 30.99 | 35.48 |
| OQU89633 | Sorghum | cytosol | 44.01 | 35.31 |
| KRG92293 | Soybean | cytosol, mitochondrion, nucleus | 37.32 | 34.98 |
| KRH28008 | Soybean | nucleus | 36.62 | 34.9 |
| KRG97871 | Soybean | nucleus | 36.97 | 34.77 |
| Os08t0478466-01 | Rice | nucleus | 39.44 | 34.57 |
| KRH77431 | Soybean | nucleus | 35.92 | 34.0 |
| KRH65251 | Soybean | nucleus | 36.97 | 33.87 |
| KXG25333 | Sorghum | cytosol | 39.08 | 33.33 |
| Zm00001d031826_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 33.8 | 32.65 |
Protein Annotations
| EntrezGene:100815772 | Gene3D:3.30.1330.80 | MapMan:35.1 | EMBL:ACUP02003440 | InterPro:AT-hook_nuclear | EnsemblPlantsGene:GLYMA_06G093400 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | UniProt:I1K9M7 | InterPro:IPR005175 | EnsemblPlants:KRH52892 | ProteinID:KRH52892 | ProteinID:KRH52892.1 |
| PFAM:PF03479 | PIRSF:PIRSF016021 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF1 |
| SUPFAM:SSF117856 | TMHMM:TMhelix | UniParc:UPI000233AA38 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:+:7353687..7356232
Molecular Weight (calculated)
29682.0 Da
IEP (calculated)
7.345
GRAVY (calculated)
-0.406
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGEYLEQQQ QHPKSETTPP SMFSKLQPQH HPFPHHPFQL SAEEENRVGA ATTPSTVQKA NSSGGDGATI EVVRRPRGRP PGSKNKPKPP VIITRDPEPA
101: MSPYILEVSG GNDVVEAIAQ FSRRKNMGIC VLTGSGTVAN VTLRQPSTTP GTTVTFHGRF DILSVSATFL PQQSGASPAV PNGFAISLAG PQGQIVGGLV
201: AGGLMAAGTV FVIAASFNNP AYHRLPPEEE GASAGDGHSP QVSGGGDSGH GQAESCGMSM YSCHLPSDVI WAPTARPQPP PPPY
101: MSPYILEVSG GNDVVEAIAQ FSRRKNMGIC VLTGSGTVAN VTLRQPSTTP GTTVTFHGRF DILSVSATFL PQQSGASPAV PNGFAISLAG PQGQIVGGLV
201: AGGLMAAGTV FVIAASFNNP AYHRLPPEEE GASAGDGHSP QVSGGGDSGH GQAESCGMSM YSCHLPSDVI WAPTARPQPP PPPY
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.