Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G252500.1 | Wheat | cytosol | 77.84 | 77.61 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 78.14 | 76.76 |
| TraesCS5B01G243200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 76.65 | 76.19 |
| Zm00001d020768_P001 | Maize | cytosol | 71.56 | 71.77 |
| Zm00001d005923_P001 | Maize | nucleus | 72.16 | 70.06 |
| OQU89633 | Sorghum | cytosol | 72.75 | 68.64 |
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 37.43 | 67.2 |
| GSMUA_Achr10P... | Banana | nucleus | 50.6 | 60.57 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 36.83 | 60.0 |
| Os08t0478466-01 | Rice | nucleus | 55.99 | 57.72 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.99 | 52.84 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 34.73 | 51.1 |
| KRH62181 | Soybean | nucleus | 41.32 | 49.29 |
| KRH72453 | Soybean | nucleus | 39.82 | 49.08 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 35.63 | 48.57 |
| KRH52892 | Soybean | nucleus | 41.02 | 48.24 |
| KRH16838 | Soybean | nucleus | 35.33 | 46.09 |
| CDY21451 | Canola | cytosol | 33.53 | 45.71 |
| CDX83182 | Canola | cytosol | 33.53 | 45.71 |
| Bra000593.1-P | Field mustard | cytosol | 35.63 | 45.25 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 35.33 | 43.87 |
| AT5G49700.1 | Thale cress | nucleus | 36.23 | 43.84 |
| Bra026211.1-P | Field mustard | plastid | 26.65 | 43.41 |
| CDY45266 | Canola | plastid | 26.65 | 43.41 |
| AT1G14490.2 | Thale cress | plastid | 29.04 | 43.11 |
| Os08t0563200-01 | Rice | cytosol | 29.64 | 42.13 |
| Os03t0270000-01 | Rice | nucleus | 31.14 | 40.31 |
| PGSC0003DMT400005182 | Potato | nucleus | 32.04 | 39.93 |
| Solyc12g087950.1.1 | Tomato | nucleus | 31.44 | 39.47 |
| Solyc04g076220.2.1 | Tomato | nucleus | 39.22 | 38.99 |
| Os02t0820800-00 | Rice | cytosol, nucleus, peroxisome | 29.34 | 36.84 |
| Os08t0159700-01 | Rice | cytosol | 31.74 | 36.68 |
| Os01t0953801-00 | Rice | nucleus | 28.44 | 35.85 |
| CDY65376 | Canola | nucleus | 29.04 | 35.27 |
| Os04t0590200-01 | Rice | cytosol | 31.44 | 34.43 |
| Os07t0235200-01 | Rice | endoplasmic reticulum, extracellular | 19.46 | 34.39 |
| Os01t0246601-00 | Rice | plastid | 21.26 | 31.14 |
| Os02t0448000-00 | Rice | nucleus | 29.04 | 30.7 |
| Os02t0713700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 30.24 | 30.06 |
| Os06t0326900-01 | Rice | nucleus | 28.44 | 29.5 |
| Os06t0136900-01 | Rice | nucleus | 28.14 | 28.66 |
Protein Annotations
| EntrezGene:107277367 | Gene3D:3.30.1330.80 | MapMan:35.1 | UniProt:A3BZP1 | ProteinID:BAT08508.1 | ProteinID:EAZ45030.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005175 | EnsemblPlantsGene:Os09g0464300 |
| EnsemblPlants:Os09t0464300-00 | PFAM:PF03479 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF41 |
| SUPFAM:SSF117856 | TMHMM:TMhelix | UniParc:UPI0000597D89 | RefSeq:XP_015611458.1 | SEG:seg | : |
Description
Similar to DNA-binding protein. (Os09t0464300-00)
Coordinates
chr9:-:17588153..17589518
Molecular Weight (calculated)
34741.3 Da
IEP (calculated)
7.345
GRAVY (calculated)
-0.269
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFCERDMNK ESMYQERDDM AGIRFATPPL PQQQQQQQLV ECFSDEVDSR GSGGEMKDAV GSGSGQLVVV GGGDGASIEV AKKRRGRPPG SKNKPKPPVV
101: ITREAEPAAA MRPHVIEIPG GRDVAEALAR FSSRRNLGIC VLAGTGAVAN VSLRHPSPGV PGSAPAAIVF HGRYEILSLS ATFLPPAMSS VAPQAAVAAA
201: GLSISLAGPH GQIVGGAVAG PLYAATTVVV VAAAFTNPTF HRLPADDDAS VSVSVSLSGS GDADEHRGHQ HKPEPQEPRQ LRRPPPHLSA AAAVSAAQPV
301: EPCGAPMYAC HPQPQEVMWP PPARTPHPPP PPPY
101: ITREAEPAAA MRPHVIEIPG GRDVAEALAR FSSRRNLGIC VLAGTGAVAN VSLRHPSPGV PGSAPAAIVF HGRYEILSLS ATFLPPAMSS VAPQAAVAAA
201: GLSISLAGPH GQIVGGAVAG PLYAATTVVV VAAAFTNPTF HRLPADDDAS VSVSVSLSGS GDADEHRGHQ HKPEPQEPRQ LRRPPPHLSA AAAVSAAQPV
301: EPCGAPMYAC HPQPQEVMWP PPARTPHPPP PPPY
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.