Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G209800.1 | Wheat | cytosol, nucleus, plastid | 86.05 | 86.72 |
| TraesCS4D01G210500.1 | Wheat | cytosol, nucleus, plastid | 85.66 | 86.33 |
| TraesCS4A01G094700.1 | Wheat | cytosol, nucleus, plastid | 85.27 | 85.94 |
| HORVU4Hr1G060280.1 | Barley | cytosol, nucleus, plastid | 85.27 | 85.94 |
| EER95114 | Sorghum | nucleus | 86.05 | 81.62 |
| Zm00001d028577_P001 | Maize | nucleus | 86.05 | 81.32 |
| Os08t0563200-01 | Rice | cytosol | 51.16 | 56.17 |
| KRH73062 | Soybean | cytosol | 48.45 | 54.59 |
| GSMUA_Achr5P28720_001 | Banana | mitochondrion, peroxisome, plastid | 53.88 | 53.05 |
| KRH15076 | Soybean | nucleus | 35.66 | 52.87 |
| KRH31005 | Soybean | nucleus | 56.2 | 50.17 |
| GSMUA_Achr7P10630_001 | Banana | plastid | 56.59 | 50.17 |
| GSMUA_Achr11P... | Banana | nucleus | 56.2 | 49.32 |
| Os02t0820800-00 | Rice | cytosol, nucleus, peroxisome | 50.78 | 49.25 |
| GSMUA_Achr6P01060_001 | Banana | nucleus | 52.71 | 48.57 |
| Os07t0235200-01 | Rice | endoplasmic reticulum, extracellular | 34.88 | 47.62 |
| KRG97871 | Soybean | nucleus | 55.43 | 47.35 |
| GSMUA_Achr6P04980_001 | Banana | cytosol, nucleus, plastid | 51.94 | 46.69 |
| GSMUA_Achr9P28280_001 | Banana | plastid | 53.49 | 46.0 |
| CDY60321 | Canola | plastid | 50.78 | 44.26 |
| AT3G55560.1 | Thale cress | plastid | 53.1 | 44.19 |
| CDY68242 | Canola | plastid | 50.78 | 44.11 |
| Bra003217.1-P | Field mustard | nucleus | 50.78 | 43.96 |
| PGSC0003DMT400069792 | Potato | cytosol, nucleus, plastid | 53.49 | 43.95 |
| Bra007176.1-P | Field mustard | plastid | 50.39 | 43.77 |
| CDY53687 | Canola | nucleus | 50.39 | 43.62 |
| Solyc05g053000.1.1 | Tomato | nucleus | 52.71 | 43.45 |
| CDY41211 | Canola | plastid | 49.61 | 43.39 |
| CDY02949 | Canola | plastid | 51.16 | 43.0 |
| VIT_13s0019g02080.t01 | Wine grape | nucleus | 54.26 | 42.81 |
| Bra014735.1-P | Field mustard | plastid | 50.78 | 42.67 |
| CDX76085 | Canola | plastid | 50.78 | 42.67 |
| GSMUA_Achr7P15000_001 | Banana | nucleus | 46.12 | 42.65 |
| Os08t0159700-01 | Rice | cytosol | 45.35 | 40.48 |
| Os04t0590200-01 | Rice | cytosol | 46.9 | 39.67 |
| Os06t0326900-01 | Rice | nucleus | 47.67 | 38.2 |
| Os02t0448000-00 | Rice | nucleus | 44.57 | 36.39 |
| Os02t0713700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 47.29 | 36.31 |
| Os01t0953801-00 | Rice | nucleus | 37.21 | 36.23 |
| Os06t0136900-01 | Rice | nucleus | 45.35 | 35.67 |
| Os01t0246601-00 | Rice | plastid | 31.01 | 35.09 |
| Os09t0464300-00 | Rice | nucleus | 40.31 | 31.14 |
| Os08t0478466-01 | Rice | nucleus | 38.76 | 30.86 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EntrezGene:4332382 | ProteinID:AAP06862.1 | ProteinID:AAP06928.1 | ProteinID:ABF95202.1 |
| EMBL:AK061579 | EMBL:AK106069 | InterPro:AT-hook_nuclear | ProteinID:BAF11596.1 | ProteinID:BAS83463.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045824 |
| InterPro:IPR005175 | EnsemblPlantsGene:Os03g0270000 | EnsemblPlants:Os03t0270000-01 | PFAM:PF03479 | PIRSF:PIRSF016021 | InterPro:PPC_dom |
| PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF40 | UniProt:Q84K39 | SUPFAM:SSF117856 | UniParc:UPI000018DC04 |
| RefSeq:XP_015628254.1 | SEG:seg | : | : | : | : |
Description
Protein of unknown function DUF296 domain containing protein. (Os03t0270000-01)
Coordinates
chr3:+:9022593..9023708
Molecular Weight (calculated)
25860.5 Da
IEP (calculated)
7.185
GRAVY (calculated)
-0.219
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSIDGHSLQ QHQGYSHGGG AGGSNEEEEA SPPPGGGSAT GSAGRRPRGR PPGSKNKPKP PVVVTRESPN AMRSHVLEIA SGADIVEAIA GFSRRRQRGV
101: SVLSGSGAVT NVTLRQPAGT GAAAVALRGR FEILSMSGAF LPAPAPPGAT GLAVYLAGGQ GQVVGGSVMG ELIASGPVMV IAATFGNATY ERLPLDQEGE
201: EGAVLSGSEG AAAQMEQQSS GGAVVPPPMY AAVQQTPPHD MFGQWGHAAV ARPPPTSF
101: SVLSGSGAVT NVTLRQPAGT GAAAVALRGR FEILSMSGAF LPAPAPPGAT GLAVYLAGGQ GQVVGGSVMG ELIASGPVMV IAATFGNATY ERLPLDQEGE
201: EGAVLSGSEG AAAQMEQQSS GGAVVPPPMY AAVQQTPPHD MFGQWGHAAV ARPPPTSF
001: MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF
Arabidopsis Description
AHL21AT-hook motif nuclear-localized protein 21 [Source:UniProtKB/Swiss-Prot;Acc:O82166]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.