Factsheet for Bra014735.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76085	Canola	plastid	100.0	100.0
Bra003217.1-P	Field mustard	nucleus	85.02	87.58
Bra007176.1-P	Field mustard	plastid	83.71	86.53
AT3G55560.1	Thale cress	plastid	87.3	86.45
KRH73062	Soybean	cytosol	41.69	55.9
KRH15076	Soybean	nucleus	31.6	55.75
GSMUA_Achr5P28720_001	Banana	mitochondrion, peroxisome, plastid	45.93	53.82
KRH31005	Soybean	nucleus	50.49	53.63
TraesCS4A01G094700.1	Wheat	cytosol, nucleus, plastid	43.65	52.34
KRG97871	Soybean	nucleus	51.14	51.99
TraesCS4B01G209800.1	Wheat	cytosol, nucleus, plastid	43.32	51.95
TraesCS4D01G210500.1	Wheat	cytosol, nucleus, plastid	43.32	51.95
HORVU4Hr1G060280.1	Barley	cytosol, nucleus, plastid	43.0	51.56
Os03t0270000-01	Rice	nucleus	42.67	50.78
GSMUA_Achr11P...	Banana	nucleus	47.56	49.66
VIT_13s0019g02080.t01	Wine grape	nucleus	52.44	49.24
EER95114	Sorghum	nucleus	43.32	48.9
Zm00001d028577_P001	Maize	nucleus	42.67	47.99
GSMUA_Achr7P10630_001	Banana	plastid	44.63	47.08
PGSC0003DMT400069792	Potato	cytosol, nucleus, plastid	46.91	45.86
Solyc05g053000.1.1	Tomato	nucleus	45.6	44.73
GSMUA_Achr6P01060_001	Banana	nucleus	40.07	43.93
GSMUA_Achr6P04980_001	Banana	cytosol, nucleus, plastid	39.74	42.51
Bra039338.1-P	Field mustard	nucleus	41.69	41.56
Bra040184.1-P	Field mustard	cytosol, nucleus, peroxisome	42.35	41.4
Bra004911.1-P	Field mustard	nucleus	41.37	41.23
GSMUA_Achr9P28280_001	Banana	plastid	40.07	41.0
Bra016853.1-P	Field mustard	plastid	34.85	41.0
Bra040135.1-P	Field mustard	cytosol, nucleus, peroxisome	39.09	40.68
Bra000281.1-P	Field mustard	plastid	34.53	40.61
Bra004732.1-P	Field mustard	plastid	34.53	40.61
Bra026211.1-P	Field mustard	plastid	27.04	40.49
Bra003717.1-P	Field mustard	nucleus	37.78	40.42
GSMUA_Achr7P15000_001	Banana	nucleus	36.48	40.14
Bra015738.1-P	Field mustard	nucleus	37.46	39.93
Bra040183.1-P	Field mustard	cytosol	37.78	39.59
Bra012639.1-P	Field mustard	cytosol	37.46	39.52
Bra008262.1-P	Field mustard	nucleus	35.5	37.98
Bra017324.1-P	Field mustard	cytosol, nucleus, peroxisome	35.18	37.76
Bra005355.1-P	Field mustard	cytosol	34.53	37.32
Bra000593.1-P	Field mustard	cytosol	31.92	37.26
Bra012256.1-P	Field mustard	nucleus	36.48	36.25
Bra016444.1-P	Field mustard	nucleus	37.13	36.19
Bra013649.1-P	Field mustard	nucleus	37.46	35.28
Bra011612.1-P	Field mustard	cytosol, nucleus, peroxisome	34.53	35.1
Bra019355.1-P	Field mustard	nucleus	37.13	34.86
Bra025854.1-P	Field mustard	nucleus	32.25	34.62
Bra023007.1-P	Field mustard	cytosol, nucleus, peroxisome	34.85	31.56

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	InterPro:AT-hook_nuclear	EnsemblPlantsGene:Bra014735	EnsemblPlants:Bra014735.1	EnsemblPlants:Bra014735.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005175
UniProt:M4DE16	PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100
PANTHER:PTHR31100:SF13	SUPFAM:SSF117856	UniParc:UPI000254495D	SEG:seg	:	:

Description

AT3G55560 (E=7e-080) AGF2 | AGF2 (AT-hook protein of GA feedback 2)

Coordinates

chrA04:+:2668587..2669510

Molecular Weight (calculated)

32182.6 Da

IEP (calculated)

6.034

GRAVY (calculated)

-0.596

Length

307 amino acids

Sequence
(BLAST)

001: MANPWWVGNV AMGGVESPVT SSAPSMHHRS NNPSMPRSDP RLDHDFANNS GSPNTQTQTQ NSQEEPNSRD EVLAIEPGSG SGSTGRRPRG RPPGSKNKPK
101: NPVVVSKESP NSLQSHVLEI ATGTDVAEAL NAFARRRGRG VSVLSGSGLV TNVTLRQPAV SGGVLSLRGQ FEILSMCGAF LPTSGSPAAA AGLTVYLAGA
201: QGQVLGGGVA GPLTASGPVI VIAATFSNAT YERLPIEDDQ QQPQLEEAKK EKEKDDNESG NDGNEGSMQP LPPPMYNMPP GFMPNGQQMA QHDVYWGAPP
301: PRGPPSY

Best Arabidopsis Sequence Match ( AT3G55560.1 )
(BLAST)

001: MANPWWVGNV AIGGVESPVT SSAPSLHHRN SNNNNPPTMT RSDPRLDHDF TTNNSGSPNT QTQSQEEQNS RDEQPAVEPG SGSGSTGRRP RGRPPGSKNK
101: PKSPVVVTKE SPNSLQSHVL EIATGADVAE SLNAFARRRG RGVSVLSGSG LVTNVTLRQP AASGGVVSLR GQFEILSMCG AFLPTSGSPA AAAGLTIYLA
201: GAQGQVVGGG VAGPLIASGP VIVIAATFCN ATYERLPIEE EQQQEQPLQL EDGKKQKEEN DDNESGNNGN EGSMQPPMYN MPPNFIPNGH QMAQHDVYWG
301: GPPPRAPPSY

Arabidopsis Description

AHL15AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VH84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.