Factsheet for Bra004911.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74739	Canola	nucleus	98.7	98.06
CDY18931	Canola	nucleus	97.08	96.76
Bra039338.1-P	Field mustard	nucleus	90.58	90.58
AT2G45430.1	Thale cress	nucleus	91.23	88.64
KRH76289	Soybean	nucleus	60.06	64.24
VIT_15s0048g00780.t01	Wine grape	nucleus	62.34	64.0
KRH65251	Soybean	nucleus	63.31	62.9
PGSC0003DMT400033248	Potato	nucleus	62.01	62.01
Solyc01g091470.2.1	Tomato	nucleus	60.71	61.92
Bra019355.1-P	Field mustard	nucleus	57.79	54.43
GSMUA_Achr1P19850_001	Banana	nucleus	54.22	54.4
Bra013649.1-P	Field mustard	nucleus	55.19	52.15
Bra040183.1-P	Field mustard	cytosol	46.1	48.46
Bra012639.1-P	Field mustard	cytosol	45.78	48.45
Bra017324.1-P	Field mustard	cytosol, nucleus, peroxisome	43.18	46.5
Bra005355.1-P	Field mustard	cytosol	42.21	45.77
Bra040184.1-P	Field mustard	cytosol, nucleus, peroxisome	46.1	45.22
Bra000281.1-P	Field mustard	plastid	38.31	45.21
Bra004732.1-P	Field mustard	plastid	38.31	45.21
Bra015738.1-P	Field mustard	nucleus	41.23	44.1
Bra007176.1-P	Field mustard	plastid	42.21	43.77
Bra008262.1-P	Field mustard	nucleus	40.26	43.21
Bra016853.1-P	Field mustard	plastid	36.36	42.91
Bra003717.1-P	Field mustard	nucleus	39.61	42.51
Bra011612.1-P	Field mustard	cytosol, nucleus, peroxisome	41.56	42.38
Bra003217.1-P	Field mustard	nucleus	40.91	42.28
Bra012256.1-P	Field mustard	nucleus	41.88	41.75
Bra014735.1-P	Field mustard	plastid	41.23	41.37
Bra040135.1-P	Field mustard	cytosol, nucleus, peroxisome	39.29	41.02
Bra016444.1-P	Field mustard	nucleus	41.88	40.95
GSMUA_Achr3P11300_001	Banana	nucleus	30.19	40.61
Bra026211.1-P	Field mustard	plastid	26.62	40.0
Bra023007.1-P	Field mustard	cytosol, nucleus, peroxisome	42.86	38.94
Bra025854.1-P	Field mustard	nucleus	35.06	37.76
Bra000593.1-P	Field mustard	cytosol	29.87	34.98

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	InterPro:AT-hook_nuclear	EnsemblPlantsGene:Bra004911	EnsemblPlants:Bra004911.1	EnsemblPlants:Bra004911.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005175
UniProt:M4CL25	PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100
PANTHER:PTHR31100:SF2	SUPFAM:SSF117856	UniParc:UPI0002547F20	SEG:seg	:	:

Description

AT2G45430 (E=2e-096) | DNA-binding protein-related

Coordinates

chrA05:+:2444988..2445914

Molecular Weight (calculated)

32846.6 Da

IEP (calculated)

7.444

GRAVY (calculated)

-0.578

Length

308 amino acids

Sequence
(BLAST)

001: MDQVSRSLPF LSRDLHLHPH HQFQHQQQHN HVHEIDQHRI SGLKRDRDTK IDPNEHSPAG KDQNTPGSGG ETGGGDNQIT RRPRGRPAGS KNKPKPPIIV
101: TRDSANALKS HVMEVANGCD VMESVTVFAR RRQRGVCVLS GNGAVTNVTI RQPATVPGGG SSVVNLHGRF EILSLSGSFL PPPAPPAASG LTIYLAGGQG
201: QVVGGSVVGP LMASGPVMIM AASFGNAAYE RLPLEEEDQE EQQTSGAVVN NNNNIDGNGT MGGGTQTQQQ QQLMQDPTSF IQGLQPNLMS SSVQLPGEAY
301: WGTPRPSF

Best Arabidopsis Sequence Match ( AT2G45430.1 )
(BLAST)

001: MDQVSRSLPP PFLSRDLHLH PHHQFQHQQQ QQQQNHGHDI DQHRIGGLKR DRDADIDPNE HSSAGKDQST PGSGGESGGG GGGDNHITRR PRGRPAGSKN
101: KPKPPIIITR DSANALKSHV MEVANGCDVM ESVTVFARRR QRGICVLSGN GAVTNVTIRQ PASVPGGGSS VVNLHGRFEI LSLSGSFLPP PAPPAASGLT
201: IYLAGGQGQV VGGSVVGPLM ASGPVVIMAA SFGNAAYERL PLEEDDQEEQ TAGAVANNID GNATMGGGTQ TQTQTQQQQQ QQLMQDPTSF IQGLPPNLMN
301: SVQLPAEAYW GTPRPSF

Arabidopsis Description

AHL22AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VXD2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.