Factsheet for Bra023007.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72485	Canola	nucleus	80.53	100.0
AT2G35270.1	Thale cress	nucleus	74.34	88.42
Bra005355.1-P	Field mustard	cytosol	73.16	87.32
Bra017324.1-P	Field mustard	cytosol, nucleus, peroxisome	73.45	87.06
Bra040183.1-P	Field mustard	cytosol	54.57	63.14
Bra012639.1-P	Field mustard	cytosol	53.39	62.2
GSMUA_Achr8P14790_001	Banana	plastid	48.38	58.78
Bra000281.1-P	Field mustard	plastid	35.99	46.74
Bra004732.1-P	Field mustard	plastid	34.81	45.21
Bra016853.1-P	Field mustard	plastid	33.92	44.06
Bra039338.1-P	Field mustard	nucleus	38.94	42.86
Bra004911.1-P	Field mustard	nucleus	38.94	42.86
Bra019355.1-P	Field mustard	nucleus	41.3	42.81
Bra040184.1-P	Field mustard	cytosol, nucleus, peroxisome	38.94	42.04
Bra011612.1-P	Field mustard	cytosol, nucleus, peroxisome	37.17	41.72
Bra013649.1-P	Field mustard	nucleus	40.12	41.72
Bra008262.1-P	Field mustard	nucleus	34.22	40.42
Bra026211.1-P	Field mustard	plastid	24.19	40.0
Bra015738.1-P	Field mustard	nucleus	33.92	39.93
Bra003717.1-P	Field mustard	nucleus	33.63	39.72
Bra040135.1-P	Field mustard	cytosol, nucleus, peroxisome	34.51	39.66
Bra012256.1-P	Field mustard	nucleus	34.51	37.86
Bra016444.1-P	Field mustard	nucleus	35.1	37.78
Bra007176.1-P	Field mustard	plastid	31.86	36.36
Bra000593.1-P	Field mustard	cytosol	28.02	36.12
Bra025854.1-P	Field mustard	nucleus	30.38	36.01
Bra003217.1-P	Field mustard	nucleus	31.27	35.57
Bra014735.1-P	Field mustard	plastid	31.56	34.85

Protein Annotations

EnsemblPlants:Bra023007.1	EnsemblPlants:Bra023007.1-P	EnsemblPlantsGene:Bra023007	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31100	PANTHER:PTHR31100:SF14	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856
UniParc:UPI000253FE26	UniProt:M4E2K6	MapMan:35.1	:	:	:

Description

AT2G35270 (E=2e-092) | DNA-binding protein-related

Coordinates

chrA03:+:8195212..8198756

Molecular Weight (calculated)

35174.7 Da

IEP (calculated)

6.172

GRAVY (calculated)

-0.115

Length

339 amino acids

Sequence
(BLAST)

001: MAGLDLGSTS RYVHNVGQFS TDNHHEDDGG AGGTLQENIN FETFLATTNI ESWLQLEPLQ VVASDGTSSR RGAVQLEPVE KLVGVRDVDV VKLMFSCSGN
101: HHHQGLDLIV SNDNSGLGGG GGGGSGDLVM RRPRGRPAGS KNKPKPPTIV TRESANTLRA HILEVGSGFD VFECISTYAR RRQRGICVMS GTGTVTNVSI
201: RQPTAVGAVL TLRGTFEILS LSGSFLPPPA PPGATSLTIF LAGAQGQVVG GNVVGELMAA GPVMVMAASF TNVAYERLPL DEHEEQLLVQ SGGGGGGNIY
301: SEATGGGGGL PFFSLPMSLP HMGGEHWPGN SAGTGRAPF

Best Arabidopsis Sequence Match ( AT2G35270.1 )
(BLAST)

001: MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF

Arabidopsis Description

AHL21AT-hook motif nuclear-localized protein 21 [Source:UniProtKB/Swiss-Prot;Acc:O82166]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.