Factsheet for GSMUA_Achr8P14790_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P23390_001	Banana	plastid	62.37	68.5
GSMUA_Achr3P27580_001	Banana	cytosol, nucleus, plastid	59.86	66.53
GSMUA_Achr5P03390_001	Banana	nucleus	57.71	62.16
CDX79599	Canola	cytosol, peroxisome, plastid	59.14	60.44
GSMUA_Achr2P04780_001	Banana	cytosol, nucleus, plastid	54.48	59.61
CDY72485	Canola	nucleus	58.06	59.34
AT2G35270.1	Thale cress	nucleus	60.57	59.3
Bra017324.1-P	Field mustard	cytosol, nucleus, peroxisome	59.5	58.04
CDY59041	Canola	cytosol, nucleus, peroxisome	59.5	58.04
Bra005355.1-P	Field mustard	cytosol	58.06	57.04
GSMUA_Achr5P13920_001	Banana	nucleus	44.44	54.63
GSMUA_AchrUn_...	Banana	cytosol	32.62	54.49
CDX84222	Canola	cytosol	36.92	53.65
GSMUA_Achr2P04080_001	Banana	cytosol	45.16	53.62
CDY31677	Canola	cytosol	37.63	53.3
GSMUA_Achr11P...	Banana	cytosol	32.26	52.33
GSMUA_Achr5P28720_001	Banana	mitochondrion, peroxisome, plastid	45.52	48.47
Bra023007.1-P	Field mustard	cytosol, nucleus, peroxisome	58.78	48.38
GSMUA_Achr2P03140_001	Banana	cytosol, nucleus, vacuole	53.05	47.9
GSMUA_Achr1P19850_001	Banana	nucleus	52.33	47.56
GSMUA_Achr10P...	Banana	cytosol, nucleus, vacuole	51.61	47.21
GSMUA_Achr5P19550_001	Banana	cytosol	45.52	47.04
GSMUA_Achr1P08290_001	Banana	nucleus	50.18	45.6
GSMUA_Achr11P...	Banana	nucleus	46.59	44.22
GSMUA_Achr9P12320_001	Banana	plastid	44.44	44.13
GSMUA_Achr7P15000_001	Banana	nucleus	44.09	44.09
GSMUA_Achr6P01060_001	Banana	nucleus	41.58	41.43
GSMUA_Achr7P10630_001	Banana	plastid	43.01	41.24
GSMUA_Achr7P19000_001	Banana	cytosol, plasma membrane, plastid	26.52	39.78
GSMUA_Achr9P28280_001	Banana	plastid	41.94	39.0
GSMUA_Achr6P04980_001	Banana	cytosol, nucleus, plastid	39.43	38.33
GSMUA_Achr3P11300_001	Banana	nucleus	30.11	36.68
GSMUA_Achr8P23410_001	Banana	cytosol	25.81	35.12
GSMUA_Achr10P...	Banana	nucleus	33.69	33.69
GSMUA_Achr3P06770_001	Banana	cytosol	24.73	30.4
GSMUA_AchrUn_...	Banana	nucleus	36.2	30.15

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	InterPro:AT-hook_nuclear	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908
GO:GO:0009987	GO:GO:0045892	GO:GO:0048440	GO:GO:0048653	EnsemblPlantsGene:GSMUA_Achr8G14790_001	EnsemblPlants:GSMUA_Achr8P14790_001
EnsemblPlants:GSMUA_Achr8T14790_001	InterPro:IPR005175	UniProt:M0TQI2	PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom
PFscan:PS51742	PANTHER:PTHR31100	PANTHER:PTHR31100:SF21	SUPFAM:SSF117856	UniParc:UPI000294BFC5	SEG:seg

Description

Putative DNA-binding protein ESCAROLA [Source:GMGC_GENE;Acc:GSMUA_Achr8G14790_001]

Coordinates

chr8:+:12193052..12193951

Molecular Weight (calculated)

28714.9 Da

IEP (calculated)

6.912

GRAVY (calculated)

-0.209

Length

279 amino acids

Sequence
(BLAST)

001: MAGLDLGTAS RYAHHLSHRP GLHLRHHHDP DSDREGSATD QQGLEPVAAG SGPGDVVARR PRGRPQGSKN KPKPPVIITQ ESANTLRAHI LEVGAGCDIV
101: ECIATYARRR LRGICVLSGS GTVSNVTVRQ PSTAGSVVTL HGHFEILSLS GSFLPPPAPP GATSLTIFLA GGQGQVVGGN VVGTLFAAGP VIVIAASFTN
201: VAYERLPLEE EEPPQMQMQP PDPQGSGGDG GSGTSGAGGN TFSDPSGLPF YSLPLNMANS QLPVDAHGWP AGAPGRSLF

Best Arabidopsis Sequence Match ( AT4G17800.1 )
(BLAST)

001: MAGLDLGTAF RYVNHQLHRP DLHLHHNSSS DDVTPGAGMG HFTVDDEDNN NNHQGLDLAS GGGSGSSGGG GGHGGGGDVV GRRPRGRPPG SKNKPKPPVI
101: ITRESANTLR AHILEVTNGC DVFDCVATYA RRRQRGICVL SGSGTVTNVS IRQPSAAGAV VTLQGTFEIL SLSGSFLPPP APPGATSLTI FLAGGQGQVV
201: GGSVVGELTA AGPVIVIAAS FTNVAYERLP LEEDEQQQQL GGGSNGGGNL FPEVAAGGGG GLPFFNLPMN MQPNVQLPVE GWPGNSGGRG PF

Arabidopsis Description

AHL23AT-hook motif nuclear-localized protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O23620]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.