Factsheet for Bra005355.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31677	Canola	cytosol	69.01	99.49
AT2G35270.1	Thale cress	nucleus	90.49	90.18
Bra017324.1-P	Field mustard	cytosol, nucleus, peroxisome	89.08	88.46
Bra023007.1-P	Field mustard	cytosol, nucleus, peroxisome	87.32	73.16
Bra040183.1-P	Field mustard	cytosol	63.73	61.77
Bra012639.1-P	Field mustard	cytosol	62.32	60.82
GSMUA_Achr8P14790_001	Banana	plastid	57.04	58.06
Bra000281.1-P	Field mustard	plastid	43.66	47.51
Bra004732.1-P	Field mustard	plastid	43.31	47.13
Bra016853.1-P	Field mustard	plastid	42.25	45.98
Bra039338.1-P	Field mustard	nucleus	45.77	42.21
Bra004911.1-P	Field mustard	nucleus	45.77	42.21
Bra011612.1-P	Field mustard	cytosol, nucleus, peroxisome	44.01	41.39
Bra019355.1-P	Field mustard	nucleus	47.54	41.28
Bra013649.1-P	Field mustard	nucleus	46.83	40.8
Bra040184.1-P	Field mustard	cytosol, nucleus, peroxisome	44.72	40.45
Bra008262.1-P	Field mustard	nucleus	40.49	40.07
Bra015738.1-P	Field mustard	nucleus	40.49	39.93
Bra003717.1-P	Field mustard	nucleus	40.14	39.72
Bra026211.1-P	Field mustard	plastid	28.17	39.02
Bra040135.1-P	Field mustard	cytosol, nucleus, peroxisome	39.44	37.97
Bra012256.1-P	Field mustard	nucleus	40.85	37.54
Bra016444.1-P	Field mustard	nucleus	41.55	37.46
Bra007176.1-P	Field mustard	plastid	38.38	36.7
Bra003217.1-P	Field mustard	nucleus	38.03	36.24
Bra025854.1-P	Field mustard	nucleus	36.27	36.01
Bra000593.1-P	Field mustard	cytosol	33.1	35.74
Bra014735.1-P	Field mustard	plastid	37.32	34.53

Protein Annotations

EnsemblPlants:Bra005355.1	EnsemblPlants:Bra005355.1-P	EnsemblPlantsGene:Bra005355	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31100	PANTHER:PTHR31100:SF14	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856
UniParc:UPI0002547E56	UniProt:M4CMB7	MapMan:35.1	:	:	:

Description

AT2G35270 (E=1e-101) | DNA-binding protein-related

Coordinates

chrA05:-:4986762..4987616

Molecular Weight (calculated)

29303.6 Da

IEP (calculated)

7.080

GRAVY (calculated)

-0.246

Length

284 amino acids

Sequence
(BLAST)

001: MAGLDLGTTS RYVHNVEGGG VGQFSTDNHH EDGGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGA SGELVMRRPR GRPAGSKNKP KPPMIVTRES
101: ANTLRAHILE VGSGCDVFEC ISTYARRRQR GICVLSGTGT VTNVSIRQPT AVGAVVTLRG TFEILSLSGS FLPPPAPPGA TNLTILLAGA QGQVVGGNVV
201: GELMAAGPVM VMAASFTNVA YERLPLDEHE EQLQVQSGGA NMYTEATNGG GGGSLPFFSL PMSLPHMGVD NWPGNSSGAG RAPF

Best Arabidopsis Sequence Match ( AT2G35270.1 )
(BLAST)

001: MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF

Arabidopsis Description

AHL21AT-hook motif nuclear-localized protein 21 [Source:UniProtKB/Swiss-Prot;Acc:O82166]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.