Factsheet for Bra026211.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 2
cytosol 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45266	Canola	plastid	99.51	99.51
AT1G14490.2	Thale cress	plastid	67.32	61.33
Bra000593.1-P	Field mustard	cytosol	73.66	57.41
GSMUA_Achr7P19000_001	Banana	cytosol, plasma membrane, plastid	40.0	44.09
KRH62181	Soybean	nucleus	57.56	42.14
KRH72453	Soybean	nucleus	55.61	42.07
KRH52892	Soybean	nucleus	57.56	41.55
PGSC0003DMT400024250	Potato	cytosol, plastid	54.15	41.26
KRH16838	Soybean	nucleus	48.78	39.06
GSMUA_Achr8P23410_001	Banana	cytosol	38.05	38.05
PGSC0003DMT400005182	Potato	nucleus	48.78	37.31
Solyc12g087950.1.1	Tomato	nucleus	47.32	36.47
VIT_18s0001g07380.t01	Wine grape	nucleus	42.93	35.92
GSMUA_Achr10P...	Banana	nucleus	48.29	35.48
GSMUA_Achr3P06770_001	Banana	cytosol	37.56	33.92
Solyc04g076220.2.1	Tomato	nucleus	54.15	33.04
Bra017324.1-P	Field mustard	cytosol, nucleus, peroxisome	41.46	29.72
Bra003217.1-P	Field mustard	nucleus	41.46	28.52
Bra007176.1-P	Field mustard	plastid	40.98	28.28
Bra005355.1-P	Field mustard	cytosol	39.02	28.17
GSMUA_AchrUn_...	Banana	nucleus	45.85	28.06
Bra040183.1-P	Field mustard	cytosol	40.0	27.99
Bra004732.1-P	Field mustard	plastid	35.61	27.97
Bra008262.1-P	Field mustard	nucleus	39.02	27.87
Bra000281.1-P	Field mustard	plastid	35.12	27.59
Bra012639.1-P	Field mustard	cytosol	39.02	27.49
Bra016853.1-P	Field mustard	plastid	34.63	27.2
Bra014735.1-P	Field mustard	plastid	40.49	27.04
Bra003717.1-P	Field mustard	nucleus	37.56	26.83
Bra015738.1-P	Field mustard	nucleus	37.56	26.74
Os09t0464300-00	Rice	nucleus	43.41	26.65
Bra039338.1-P	Field mustard	nucleus	40.0	26.62
Bra004911.1-P	Field mustard	nucleus	40.0	26.62
Zm00001d020768_P001	Maize	cytosol	42.93	26.43
Os08t0478466-01	Rice	nucleus	40.98	25.93
TraesCS5D01G252500.1	Wheat	cytosol	41.95	25.67
TraesCS5B01G243200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	41.95	25.6
Zm00001d005923_P001	Maize	nucleus	42.44	25.29
Zm00001d031826_P001	Maize	cytosol, endoplasmic reticulum, nucleus	36.1	25.17
Bra040184.1-P	Field mustard	cytosol, nucleus, peroxisome	38.54	25.16
Bra019355.1-P	Field mustard	nucleus	40.0	25.08
TraesCS5A01G245800.1	Wheat	cytosol, endoplasmic reticulum, nucleus	41.46	25.0
KXG25333	Sorghum	cytosol	40.49	24.92
Bra011612.1-P	Field mustard	cytosol, nucleus, peroxisome	36.59	24.83
Bra013649.1-P	Field mustard	nucleus	39.02	24.54
OQU89633	Sorghum	cytosol	41.95	24.29
Bra023007.1-P	Field mustard	cytosol, nucleus, peroxisome	40.0	24.19
Bra012256.1-P	Field mustard	nucleus	35.12	23.3
Bra016444.1-P	Field mustard	nucleus	35.61	23.17
Bra040135.1-P	Field mustard	cytosol, nucleus, peroxisome	33.17	23.05
Bra025854.1-P	Field mustard	nucleus	30.24	21.68

Protein Annotations

EnsemblPlants:Bra026211.1	EnsemblPlants:Bra026211.1-P	EnsemblPlantsGene:Bra026211	Gene3D:3.30.1330.80	InterPro:AT-hook_nuclear	InterPro:IPR005175
InterPro:PPC_dom	PANTHER:PTHR31100	PANTHER:PTHR31100:SF1	PFAM:PF03479	PFscan:PS51742	PIRSF:PIRSF016021
SEG:seg	SUPFAM:SSF117856	UniParc:UPI000253EF35	UniProt:M4EBQ2	MapMan:35.1	:

Description

AT1G14490 (E=8e-065) | DNA-binding protein-related

Coordinates

chrA06:-:5564999..5565616

Molecular Weight (calculated)

21228.3 Da

IEP (calculated)

8.479

GRAVY (calculated)

-0.122

Length

205 amino acids

Sequence
(BLAST)

001: MEPVQRQRPR GRPQGSKNKP KPPVFLTVEP PMSPYILQVP SGNDVVASIN RFCRERSIGL CLLSGSGSVA DVTLRQPPPA PPGSTITFHG KFDLLSVSAA
101: FLPPPVSSSF TVSLAGPQGQ IIGGFVSGPL ISAGPVYVVA ASLNNPSYYR LPAEVKQENS SASAEAEEGK GQSPPVSGGG GESCHIEGSD VVWTPAAGIL
201: TKPSL

Best Arabidopsis Sequence Match ( AT5G49700.1 )
(BLAST)

001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY

Arabidopsis Description

AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.