Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020768_P001 | Maize | cytosol | 81.98 | 84.68 |
| OQU89633 | Sorghum | cytosol | 84.3 | 81.92 |
| Os09t0464300-00 | Rice | nucleus | 70.06 | 72.16 |
| TraesCS5D01G252500.1 | Wheat | cytosol | 68.9 | 70.75 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 69.19 | 70.0 |
| TraesCS5B01G243200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 68.31 | 69.94 |
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 33.72 | 62.37 |
| GSMUA_Achr10P... | Banana | nucleus | 45.64 | 56.27 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 33.43 | 56.1 |
| Zm00001d031826_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 42.73 | 50.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.26 | 49.55 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 32.27 | 48.9 |
| KRH72453 | Soybean | nucleus | 36.34 | 46.13 |
| KRH62181 | Soybean | nucleus | 36.92 | 45.36 |
| CDY21451 | Canola | cytosol | 31.98 | 44.9 |
| CDX83182 | Canola | cytosol | 31.98 | 44.9 |
| KRH52892 | Soybean | nucleus | 36.92 | 44.72 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 31.69 | 44.49 |
| Bra000593.1-P | Field mustard | cytosol | 33.72 | 44.11 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 34.01 | 43.49 |
| KRH16838 | Soybean | nucleus | 31.69 | 42.58 |
| CDY45266 | Canola | plastid | 25.29 | 42.44 |
| Bra026211.1-P | Field mustard | plastid | 25.29 | 42.44 |
| AT1G14490.2 | Thale cress | plastid | 27.62 | 42.22 |
| AT5G49700.1 | Thale cress | nucleus | 33.72 | 42.03 |
| Solyc04g076220.2.1 | Tomato | nucleus | 38.66 | 39.58 |
| Solyc12g087950.1.1 | Tomato | nucleus | 30.23 | 39.1 |
| PGSC0003DMT400005182 | Potato | nucleus | 30.23 | 38.81 |
| Zm00001d018508_P001 | Maize | cytosol | 27.62 | 38.78 |
| Zm00001d028577_P001 | Maize | nucleus | 29.94 | 37.73 |
| Zm00001d031887_P001 | Maize | nucleus | 29.36 | 37.55 |
| Zm00001d049906_P001 | Maize | nucleus | 28.49 | 36.98 |
| Zm00001d042060_P001 | Maize | plastid | 25.0 | 35.1 |
| CDY65376 | Canola | nucleus | 27.91 | 34.91 |
| Zm00001d039249_P001 | Maize | cytosol | 15.12 | 33.55 |
| Zm00001d024537_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 27.91 | 32.99 |
| Zm00001d046696_P001 | Maize | cytosol, nucleus, peroxisome | 25.58 | 32.47 |
| Zm00001d051620_P001 | Maize | plastid | 29.07 | 31.55 |
| Zm00001d049521_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 27.33 | 31.44 |
| Zm00001d002495_P001 | Maize | cytosol, nucleus, peroxisome | 28.2 | 31.39 |
| Zm00001d017825_P001 | Maize | plastid | 29.36 | 31.17 |
| Zm00001d026035_P001 | Maize | cytosol, nucleus, peroxisome | 27.91 | 30.97 |
| Zm00001d009031_P001 | Maize | mitochondrion, plastid | 18.02 | 30.54 |
| Zm00001d036088_P001 | Maize | extracellular | 24.71 | 30.36 |
| Zm00001d045427_P001 | Maize | cytosol, nucleus, plasma membrane | 29.94 | 30.21 |
| Zm00001d045928_P001 | Maize | nucleus | 26.45 | 29.74 |
| Zm00001d016132_P001 | Maize | nucleus | 25.87 | 28.8 |
| Zm00001d053429_P001 | Maize | nucleus | 26.74 | 28.75 |
Protein Annotations
| EnsemblPlants:Zm00001d005923_P001 | EnsemblPlants:Zm00001d005923_T001 | EnsemblPlantsGene:Zm00001d005923 | EntrezGene:103647499 | Gene3D:3.30.1330.80 | InterPro:IPR005175 |
| InterPro:PPC_dom | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF41 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:ONM22369.1 |
| SEG:seg | SUPFAM:SSF117856 | UniParc:UPI000221E9A9 | UniProt:A0A1D6ERK5 | MapMan:35.1 | : |
Description
AT-hook motif nuclear-localized protein 17
Coordinates
chr2:-:192920444..192921478
Molecular Weight (calculated)
36040.6 Da
IEP (calculated)
7.465
GRAVY (calculated)
-0.426
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLGKRDMSQ ERLYQDRKDV PPIHFTTPPP PPSHHHPQQH GRHGEQQQQL ECFSDEVDSR GSAERKEPAS GGAPVVPGGG DDGASIELSK KRRGRPPGSK
101: NKPKPPVVVT REAEPAAAMR PHVIEIPCGC DVADALARFA ARRNLGICVL AGTGAVANVS LRHPSPGGPA VMFHGQYEVL SISATFLPPA MSAVAPQAAA
201: AAACLSISLA GPHGQIVGGA VAGPLYAAST VVLVAAAFTN PTFHRLPADD DASVSVSVSV SLSAGSGDPA DEHRGGHQDR REQPPQEHRP LAVRRQPAPH
301: PASAAQTVEP CGPPDVPIYA ACHPQPHDVM WPPPPRAPQM PPPY
101: NKPKPPVVVT REAEPAAAMR PHVIEIPCGC DVADALARFA ARRNLGICVL AGTGAVANVS LRHPSPGGPA VMFHGQYEVL SISATFLPPA MSAVAPQAAA
201: AAACLSISLA GPHGQIVGGA VAGPLYAAST VVLVAAAFTN PTFHRLPADD DASVSVSVSV SLSAGSGDPA DEHRGGHQDR REQPPQEHRP LAVRRQPAPH
301: PASAAQTVEP CGPPDVPIYA ACHPQPHDVM WPPPPRAPQM PPPY
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.