Factsheet for Zm00001d039249_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99980	Sorghum	plastid	90.97	66.82
Zm00001d009031_P001	Maize	mitochondrion, plastid	77.42	59.11
TraesCS3B01G198900.1	Wheat	plastid	76.77	56.67
TraesCS3A01G167300.1	Wheat	plastid	76.77	55.87
HORVU3Hr1G033710.2	Barley	plastid	76.13	55.4
TraesCS3D01G173400.1	Wheat	plastid	75.48	54.93
Os01t0246601-00	Rice	plastid	70.32	47.81
Zm00001d049906_P001	Maize	nucleus	44.52	26.04
Zm00001d031887_P001	Maize	nucleus	45.16	26.02
Zm00001d024537_P001	Maize	cytosol, endoplasmic reticulum, nucleus	46.45	24.74
Zm00001d018508_P001	Maize	cytosol	38.71	24.49
Zm00001d036088_P001	Maize	extracellular	43.87	24.29
Zm00001d049521_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	46.45	24.08
Zm00001d028577_P001	Maize	nucleus	40.65	23.08
Zm00001d016132_P001	Maize	nucleus	45.81	22.98
Zm00001d053429_P001	Maize	nucleus	47.1	22.81
Zm00001d002495_P001	Maize	cytosol, nucleus, peroxisome	45.16	22.65
Zm00001d026035_P001	Maize	cytosol, nucleus, peroxisome	45.16	22.58
Zm00001d046696_P001	Maize	cytosol, nucleus, peroxisome	39.35	22.51
Zm00001d042060_P001	Maize	plastid	34.84	22.04
Zm00001d051620_P001	Maize	plastid	42.58	20.82
Zm00001d045928_P001	Maize	nucleus	40.65	20.59
Zm00001d045427_P001	Maize	cytosol, nucleus, plasma membrane	45.16	20.53
Zm00001d031826_P001	Maize	cytosol, endoplasmic reticulum, nucleus	38.71	20.41
Zm00001d017825_P001	Maize	plastid	41.94	20.06
Zm00001d020768_P001	Maize	cytosol	35.48	16.52
Zm00001d005923_P001	Maize	nucleus	33.55	15.12

Protein Annotations

EMBL:BT064989	EnsemblPlants:Zm00001d039249_P001	EnsemblPlants:Zm00001d039249_T001	EnsemblPlantsGene:Zm00001d039249	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31100	PANTHER:PTHR31100:SF11	PFAM:PF03479
PFscan:PS51742	ProteinID:ONM28117.1	SEG:seg	SUPFAM:SSF117856	TMHMM:TMhelix	UniParc:UPI000194B1A5
UniProt:C0P9M0	MapMan:35.2	:	:	:	:

Description

DNA binding protein

Coordinates

chr3:+:556424..556891

Molecular Weight (calculated)

15681.4 Da

IEP (calculated)

10.228

GRAVY (calculated)

0.463

Length

155 amino acids

Sequence
(BLAST)

001: MRAHLVEVPA GRDVLSCVSA FARRGRCGAM VLGAAGHVTD VVLREPALVL RGTMEILSLS GCFFPFPGPG SVAATGTAVF MAGPRGSVLG GGVALGGLVA
101: AGPVVVMVAT FVAAALDRLP LAKGDEAGKD VHGHHRACGW AAVCRKKKQQ QLGAN

Best Arabidopsis Sequence Match ( AT2G35270.1 )
(BLAST)

001: MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF

Arabidopsis Description

AHL21AT-hook motif nuclear-localized protein 21 [Source:UniProtKB/Swiss-Prot;Acc:O82166]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.