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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG25365 Sorghum nucleus 91.45 91.11
Zm00001d049906_P001 Maize nucleus 89.22 90.57
Os08t0563200-01 Rice cytosol 70.26 80.43
TraesCS4B01G001100.1 Wheat cytosol, nucleus, peroxisome 71.75 77.2
GSMUA_AchrUn_... Banana cytosol 46.84 75.45
HORVU6Hr1G010470.2 Barley cytosol, nucleus, peroxisome 72.49 69.39
Zm00001d018508_P001 Maize cytosol 63.2 69.39
GSMUA_Achr2P04080_001 Banana cytosol 60.59 69.36
GSMUA_Achr11P... Banana cytosol 44.24 69.19
TraesCS4A01G312400.1 Wheat nucleus 73.23 69.12
HORVU4Hr1G000870.2 Barley nucleus 73.61 68.99
TraesCS6A01G053800.1 Wheat nucleus 71.75 68.44
TraesCS6B01G072300.1 Wheat nucleus 71.75 68.44
TraesCS4D01G001800.1 Wheat nucleus 72.12 68.07
TraesCS6D01G055500.1 Wheat cytosol 71.0 67.73
Os07t0235200-01 Rice endoplasmic reticulum, extracellular 44.61 63.49
VIT_05s0049g00100.t01 Wine grape cytosol 61.34 63.46
KRG90376 Soybean nucleus 62.08 62.31
KRH31728 Soybean cytosol 62.45 62.22
GSMUA_Achr5P19550_001 Banana cytosol 61.34 61.11
KRH34516 Soybean cytosol, nucleus, peroxisome 63.2 58.62
Solyc09g089620.1.1 Tomato nucleus 61.71 58.04
PGSC0003DMT400044451 Potato nucleus 60.97 57.54
AT4G14465.1 Thale cress cytosol, nucleus, plastid 59.11 56.58
CDY23160 Canola cytosol, nucleus, vacuole 58.36 56.27
CDY12779 Canola cytosol, nucleus, vacuole 58.36 55.67
KRG92293 Soybean cytosol, mitochondrion, nucleus 62.45 55.45
Zm00001d028577_P001 Maize nucleus 51.3 50.55
Zm00001d016132_P001 Maize nucleus 52.04 45.31
Zm00001d039249_P001 Maize cytosol 26.02 45.16
Zm00001d024537_P001 Maize cytosol, endoplasmic reticulum, nucleus 48.33 44.67
HORVU0Hr1G011700.1 Barley cytosol 35.69 44.44
Zm00001d053429_P001 Maize nucleus 52.79 44.38
Zm00001d051620_P001 Maize plastid 51.3 43.53
Zm00001d046696_P001 Maize cytosol, nucleus, peroxisome 43.49 43.17
Zm00001d049521_P001 Maize cytosol, endoplasmic reticulum, peroxisome 47.58 42.81
Zm00001d036088_P001 Maize extracellular 44.24 42.5
Zm00001d002495_P001 Maize cytosol, nucleus, peroxisome 48.7 42.39
Zm00001d026035_P001 Maize cytosol, nucleus, peroxisome 48.7 42.26
Zm00001d017825_P001 Maize plastid 50.19 41.67
Zm00001d009031_P001 Maize mitochondrion, plastid 30.86 40.89
Zm00001d045928_P001 Maize nucleus 43.87 38.56
Zm00001d045427_P001 Maize cytosol, nucleus, plasma membrane 48.7 38.42
Zm00001d042060_P001 Maize plastid 31.6 34.69
Zm00001d031826_P001 Maize cytosol, endoplasmic reticulum, nucleus 36.43 33.33
Zm00001d020768_P001 Maize cytosol 37.17 30.03
Zm00001d005923_P001 Maize nucleus 37.55 29.36
Protein Annotations
Gene3D:3.30.1330.80MapMan:35.1UniProt:A0A096RF31InterPro:AT-hook_nuclearGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003680GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR005175ProteinID:ONM03878.1PFAM:PF03479
PIRSF:PIRSF016021InterPro:PPC_domPFscan:PS51742PANTHER:PTHR31100PANTHER:PTHR31100:SF3SUPFAM:SSF117856
UniParc:UPI0001950F4BEnsemblPlantsGene:Zm00001d031887EnsemblPlants:Zm00001d031887_P001EnsemblPlants:Zm00001d031887_T001SEG:seg:
Description
AT-hook motif nuclear-localized protein 20
Coordinates
chr1:+:205332444..205333253
Molecular Weight (calculated)
26804.8 Da
IEP (calculated)
7.679
GRAVY (calculated)
-0.191
Length
269 amino acids
Sequence
(BLAST)
001: MAPSSKDGAT ATEQPTSGDD DRENGGTGEP KEGAVVAGNR RPRGRPPGSK NKPKPPIFVT RDSPNALRSH VMEVAGGADV AESIAHFARR RQRGVCVLSG
101: AGTVADVALR QPAAPGAVVA LRGRFEILSL TGTFLPGPAP PGSTGLTVYL AGGQGQVVGG SVVGTLTAAG PVMVMASTFA NATYERLPLD DADEEPAGQQ
201: AAQLPPGPGG GQPMVMGGMA DPSAVPMFGG AGGVPPSLMP AGAAAASSGA GLQLGHDRLA WAHARPPPY
Best Arabidopsis Sequence Match ( AT4G14465.1 )
(BLAST)
001: MANPWWTNQS GLAGMVDHSV SSGHHQNHHH QSLLTKGDLG IAMNQSQDND QDEEDDPREG AVEVVNRRPR GRPPGSKNKP KAPIFVTRDS PNALRSHVLE
101: ISDGSDVADT IAHFSRRRQR GVCVLSGTGS VANVTLRQAA APGGVVSLQG RFEILSLTGA FLPGPSPPGS TGLTVYLAGV QGQVVGGSVV GPLLAIGSVM
201: VIAATFSNAT YERLPMEEEE DGGGSRQIHG GGDSPPRIGS NLPDLSGMAG PGYNMPPHLI PNGAGQLGHE PYTWVHARPP Y
Arabidopsis Description
AHL20AT-hook motif nuclear-localized protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWQ2]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.