Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G087520.3 | |
| HORVU5Hr1G060730.3 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G14465.1 | HORVU4Hr1G087520.3 | AT3G17860.1 | 21798944 |
| AT4G14465.1 | HORVU5Hr1G060730.3 | AT3G17860.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G010470.2 | Barley | cytosol, nucleus, peroxisome | 68.06 | 52.31 |
| HORVU4Hr1G000870.2 | Barley | nucleus | 62.5 | 47.04 |
| TraesCS6B01G072300.1 | Wheat | nucleus | 60.19 | 46.1 |
| TraesCS6A01G053800.1 | Wheat | nucleus | 59.72 | 45.74 |
| TraesCS6D01G055500.1 | Wheat | cytosol | 59.26 | 45.39 |
| Os08t0563200-01 | Rice | cytosol | 42.13 | 38.72 |
| Zm00001d049906_P001 | Maize | nucleus | 43.98 | 35.85 |
| Zm00001d031887_P001 | Maize | nucleus | 44.44 | 35.69 |
| KXG25365 | Sorghum | nucleus | 43.52 | 34.81 |
| GSMUA_Achr2P04080_001 | Banana | cytosol | 36.11 | 33.19 |
| GSMUA_Achr5P19550_001 | Banana | cytosol | 40.74 | 32.59 |
| HORVU6Hr1G091740.1 | Barley | cytosol | 43.06 | 31.85 |
| PGSC0003DMT400044451 | Potato | nucleus | 41.67 | 31.58 |
| Solyc09g089620.1.1 | Tomato | nucleus | 40.74 | 30.77 |
| AT4G14465.1 | Thale cress | cytosol, nucleus, plastid | 39.81 | 30.61 |
| VIT_05s0049g00100.t01 | Wine grape | cytosol | 36.57 | 30.38 |
| KRG90376 | Soybean | nucleus | 36.57 | 29.48 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 37.96 | 29.39 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 37.96 | 29.08 |
| KRH31728 | Soybean | cytosol | 36.11 | 28.89 |
| KRH34516 | Soybean | cytosol, nucleus, peroxisome | 37.96 | 28.28 |
| KRG92293 | Soybean | cytosol, mitochondrion, nucleus | 37.96 | 27.06 |
| HORVU4Hr1G060280.1 | Barley | cytosol, nucleus, plastid | 29.17 | 24.61 |
| GSMUA_AchrUn_... | Banana | cytosol | 18.98 | 24.55 |
| HORVU1Hr1G008650.1 | Barley | mitochondrion, nucleus, peroxisome | 34.72 | 23.29 |
| HORVU6Hr1G037640.1 | Barley | nucleus | 31.94 | 22.33 |
| HORVU6Hr1G037630.1 | Barley | nucleus | 31.94 | 22.33 |
| HORVU4Hr1G015750.1 | Barley | mitochondrion | 28.7 | 22.3 |
| GSMUA_Achr11P... | Banana | cytosol | 17.59 | 22.09 |
| HORVU6Hr1G070090.1 | Barley | plastid | 33.8 | 22.05 |
| HORVU3Hr1G033710.2 | Barley | plastid | 21.3 | 21.6 |
| HORVU7Hr1G046930.1 | Barley | cytosol, nucleus, peroxisome | 31.02 | 21.2 |
| HORVU7Hr1G070490.2 | Barley | cytosol, mitochondrion, peroxisome | 28.24 | 21.18 |
| HORVU7Hr1G093230.2 | Barley | cytosol | 28.24 | 20.13 |
| HORVU7Hr1G017700.2 | Barley | nucleus | 31.94 | 19.77 |
| Os07t0235200-01 | Rice | endoplasmic reticulum, extracellular | 15.28 | 17.46 |
| HORVU7Hr1G020390.1 | Barley | mitochondrion | 13.89 | 15.87 |
| HORVU3Hr1G108820.1 | Barley | mitochondrion | 17.13 | 14.45 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G011700.1 | EnsemblPlantsGene:HORVU0Hr1G011700 | InterPro:IPR005175 | InterPro:PPC_dom | ncoils:Coil | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF3 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI000B46C559 |
| UniProt:A0A287DZP8 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:+:66760320..66761027
Molecular Weight (calculated)
19784.6 Da
IEP (calculated)
10.164
GRAVY (calculated)
-0.417
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MANRWWDEGR LAEAPAASNQ NQQQLEEAMA MAATKVDGES SHSGGGSGQD EEPKEGAVVM VVPANRRPRG RPAGSKNKPK PPIFVTRDSP NALRSHVMEV
101: AAGADVADSI AHFSRRRQRG VCVLSGAGTV ADVALRXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXN CSCQLPRQTT QPSTKTRLNQ KLDIGLVYIC
201: NMTFVAKIFT TRPLMQ
101: AAGADVADSI AHFSRRRQRG VCVLSGAGTV ADVALRXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXN CSCQLPRQTT QPSTKTRLNQ KLDIGLVYIC
201: NMTFVAKIFT TRPLMQ
001: MANPWWTGQV NLSGLETTPP GSSQLKKPDL HISMNMAMDS GHNNHHHHQE VDNNNNDDDR DNLSGDDHEP REGAVEAPTR RPRGRPAGSK NKPKPPIFVT
101: RDSPNALKSH VMEIASGTDV IETLATFARR RQRGICILSG NGTVANVTLR QPSTAAVAAA PGGAAVLALQ GRFEILSLTG SFLPGPAPPG STGLTIYLAG
201: GQGQVVGGSV VGPLMAAGPV MLIAATFSNA TYERLPLEEE EAAERGGGGG SGGVVPGQLG GGGSPLSSGA GGGDGNQGLP VYNMPGNLVS NGGSGGGGQM
301: SGQEAYGWAQ ARSGF
101: RDSPNALKSH VMEIASGTDV IETLATFARR RQRGICILSG NGTVANVTLR QPSTAAVAAA PGGAAVLALQ GRFEILSLTG SFLPGPAPPG STGLTIYLAG
201: GQGQVVGGSV VGPLMAAGPV MLIAATFSNA TYERLPLEEE EAAERGGGGG SGGVVPGQLG GGGSPLSSGA GGGDGNQGLP VYNMPGNLVS NGGSGGGGQM
301: SGQEAYGWAQ ARSGF
Arabidopsis Description
AHL19AT-hook motif nuclear-localized protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR17]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.