Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G395400.1 | Wheat | cytosol | 80.2 | 84.08 |
| TraesCS7B01G297300.1 | Wheat | cytosol | 78.88 | 81.85 |
| EER88668 | Sorghum | cytosol | 60.4 | 67.78 |
| Zm00001d046696_P001 | Maize | cytosol, nucleus, peroxisome | 57.76 | 64.58 |
| KRH51551 | Soybean | plastid | 31.35 | 46.57 |
| Solyc04g082810.2.1 | Tomato | cytosol, nucleus, peroxisome | 33.99 | 42.04 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 38.28 | 41.28 |
| PGSC0003DMT400025705 | Potato | plastid | 33.99 | 39.62 |
| HORVU6Hr1G010470.2 | Barley | cytosol, nucleus, peroxisome | 35.97 | 38.79 |
| HORVU7Hr1G046930.1 | Barley | cytosol, nucleus, peroxisome | 39.93 | 38.29 |
| HORVU4Hr1G000870.2 | Barley | nucleus | 35.97 | 37.98 |
| HORVU4Hr1G060280.1 | Barley | cytosol, nucleus, plastid | 32.01 | 37.89 |
| HORVU6Hr1G070090.1 | Barley | plastid | 40.26 | 36.86 |
| CDY20404 | Canola | nucleus | 32.67 | 36.53 |
| CDX87591 | Canola | nucleus | 33.33 | 36.07 |
| HORVU6Hr1G091740.1 | Barley | cytosol | 34.65 | 35.96 |
| Bra015738.1-P | Field mustard | nucleus | 33.66 | 35.42 |
| CDY45983 | Canola | nucleus | 33.66 | 35.42 |
| HORVU4Hr1G015750.1 | Barley | mitochondrion | 32.34 | 35.25 |
| Bra008262.1-P | Field mustard | nucleus | 33.0 | 34.84 |
| VIT_18s0122g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 36.3 | 34.81 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 31.68 | 34.78 |
| CDX68095 | Canola | cytosol | 30.69 | 34.44 |
| AT1G76500.1 | Thale cress | nucleus | 34.32 | 34.44 |
| CDX96613 | Canola | nucleus | 33.66 | 33.89 |
| HORVU7Hr1G020390.1 | Barley | mitochondrion | 21.12 | 33.86 |
| HORVU3Hr1G033710.2 | Barley | plastid | 23.76 | 33.8 |
| Bra003717.1-P | Field mustard | nucleus | 32.01 | 33.8 |
| CDX85952 | Canola | cytosol | 30.03 | 33.46 |
| HORVU7Hr1G070490.2 | Barley | cytosol, mitochondrion, peroxisome | 31.68 | 33.33 |
| Bra012256.1-P | Field mustard | nucleus | 33.66 | 33.01 |
| AT1G20900.1 | Thale cress | nucleus | 33.66 | 32.8 |
| CDY31511 | Canola | nucleus | 29.04 | 32.71 |
| Bra016444.1-P | Field mustard | nucleus | 33.99 | 32.7 |
| HORVU6Hr1G037640.1 | Barley | nucleus | 33.33 | 32.69 |
| HORVU6Hr1G037630.1 | Barley | nucleus | 33.33 | 32.69 |
| HORVU1Hr1G008650.1 | Barley | mitochondrion, nucleus, peroxisome | 34.65 | 32.61 |
| CDY29494 | Canola | nucleus | 28.71 | 31.75 |
| CDY01347 | Canola | nucleus | 28.38 | 31.62 |
| CDY33658 | Canola | nucleus | 30.36 | 31.51 |
| HORVU7Hr1G017700.2 | Barley | nucleus | 35.97 | 31.23 |
| CDY31858 | Canola | nucleus | 28.05 | 31.14 |
| Bra025854.1-P | Field mustard | nucleus | 29.04 | 30.77 |
| HORVU0Hr1G011700.1 | Barley | cytosol | 20.13 | 28.24 |
| HORVU3Hr1G108820.1 | Barley | mitochondrion | 21.12 | 25.0 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G093230.2 | EnsemblPlantsGene:HORVU7Hr1G093230 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | ncoils:Coil |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF20 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 |
| UniParc:UPI000B47C3CB | UniProt:A0A287XCR4 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:570205329..570206355
Molecular Weight (calculated)
25276.4 Da
IEP (calculated)
8.080
GRAVY (calculated)
0.029
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: QQLQLPAVTM PAPAPAVAAS XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXQQQQGQGQ GEGQMGAAAG AIVPLRRPRG
101: RPMGSKNKPK PPIIITRDSP DALHSHILEV ASGADVAACV AEYARRRGRG VCVLGASGSV VDVVVRGAAA PAPLPGRFEL LSMTGTVLPP PAPSEASGLA
201: VMLSAGQGQV LGGCVVGPLV AAGTVTLFAA TFANAVYERL PLQDAAPDAD VKPDLSAAPD ASVSQQVQAQ QPLAISQAMA MGAGYPDHRS PQYPWGGHQG
301: GGI
101: RPMGSKNKPK PPIIITRDSP DALHSHILEV ASGADVAACV AEYARRRGRG VCVLGASGSV VDVVVRGAAA PAPLPGRFEL LSMTGTVLPP PAPSEASGLA
201: VMLSAGQGQV LGGCVVGPLV AAGTVTLFAA TFANAVYERL PLQDAAPDAD VKPDLSAAPD ASVSQQVQAQ QPLAISQAMA MGAGYPDHRS PQYPWGGHQG
301: GGI
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.