CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008262.1-P	Field mustard	nucleus	98.96	99.3
CDY20404	Canola	nucleus	92.71	98.52
CDX88286	Canola	cytosol, endoplasmic reticulum, nucleus	80.21	83.7
CDX87591	Canola	nucleus	80.9	83.21
CDX68095	Canola	cytosol	73.96	78.89
AT1G76500.1	Thale cress	nucleus	82.29	78.48
CDX85952	Canola	cytosol	73.61	77.94
CDX96613	Canola	nucleus	73.61	70.43
CDY31511	Canola	nucleus	63.19	67.66
CDY33658	Canola	nucleus	68.4	67.47
CDY29494	Canola	nucleus	62.85	66.06
CDY31858	Canola	nucleus	62.5	65.93
CDY01347	Canola	nucleus	62.15	65.81
KRH51551	Soybean	plastid	43.4	61.27
Solyc04g082810.2.1	Tomato	cytosol, nucleus, peroxisome	50.69	59.59
PGSC0003DMT400025705	Potato	plastid	52.08	57.69
Zm00001d051620_P001	Maize	plastid	53.82	48.9
Zm00001d017825_P001	Maize	plastid	54.17	48.15
GSMUA_Achr9P12320_001	Banana	plastid	46.88	48.04
EES05630	Sorghum	cytosol, mitochondrion, nucleus, plastid	54.51	47.87
TraesCS6D01G258400.1	Wheat	plastid	54.51	47.72
TraesCS6B01G306100.1	Wheat	plastid	54.51	47.72
TraesCS6A01G277700.1	Wheat	plastid	54.17	47.71
HORVU6Hr1G070090.1	Barley	plastid	54.51	47.43
Os02t0713700-01	Rice	cytosol, mitochondrion, nucleus, plastid	54.86	47.02
CDX90445	Canola	plastid	43.4	45.62
VIT_18s0122g00590.t01	Wine grape	endoplasmic reticulum, plasma membrane	49.65	45.25
CDX69136	Canola	cytosol, nucleus, peroxisome	47.22	45.03
CDX75499	Canola	cytosol, nucleus, peroxisome	46.88	44.7
KXG19929	Sorghum	nucleus	48.61	44.03
Zm00001d045928_P001	Maize	nucleus	46.53	43.79
CDX79838	Canola	plastid	39.24	43.46
CDY53650	Canola	plastid	39.24	43.46
CDX79599	Canola	cytosol, peroxisome, plastid	40.97	43.22
Os06t0326900-01	Rice	nucleus	47.92	42.86
CDY72485	Canola	nucleus	40.62	42.86
CDY23160	Canola	cytosol, nucleus, vacuole	41.32	42.65
CDX78802	Canola	cytosol	43.06	42.61
CDY12779	Canola	cytosol, nucleus, vacuole	41.67	42.55
CDY54780	Canola	cytosol	43.06	42.47
HORVU7Hr1G046930.1	Barley	cytosol, nucleus, peroxisome	46.53	42.41
TraesCS7B01G193900.1	Wheat	cytosol, nucleus, peroxisome	47.22	42.24
TraesCS7A01G225700.1	Wheat	nucleus	47.22	42.11
CDY59041	Canola	cytosol, nucleus, peroxisome	41.67	41.96
CDY64701	Canola	nucleus	44.79	41.48
TraesCS7D01G228800.1	Wheat	nucleus	45.49	41.2
CDY49327	Canola	cytosol, endoplasmic reticulum, nucleus	44.79	41.08
CDY18931	Canola	nucleus	43.75	40.78
CDX74739	Canola	nucleus	43.75	40.65
CDY14862	Canola	plastid	36.81	40.61
CDY70947	Canola	plastid	36.81	40.61
Zm00001d046696_P001	Maize	cytosol, nucleus, peroxisome	37.5	39.85
CDY41211	Canola	plastid	40.62	39.66
CDY60321	Canola	plastid	40.62	39.53
CDY45266	Canola	plastid	28.12	39.51
CDY68242	Canola	plastid	40.62	39.39
CDY37040	Canola	nucleus	42.01	39.29
CDY53687	Canola	nucleus	40.62	39.26
CDX84222	Canola	cytosol	26.04	39.06
CDY21124	Canola	cytosol, endoplasmic reticulum, peroxisome	38.89	38.89
CDY27387	Canola	nucleus	42.01	38.78
CDY21451	Canola	cytosol	32.99	38.78
EER88668	Sorghum	cytosol	36.11	38.52
CDY30003	Canola	cytosol, nucleus, peroxisome, plastid	38.54	38.41
CDX83182	Canola	cytosol	32.64	38.37
CDY31677	Canola	cytosol	25.35	37.06
CDX98771	Canola	nucleus	40.62	36.91
CDY41289	Canola	nucleus	40.28	36.83
CDX82978	Canola	cytosol, nucleus, plastid	40.28	36.83
CDY02949	Canola	plastid	39.24	36.81
TraesCS7B01G297300.1	Wheat	cytosol	37.15	36.64
CDX94128	Canola	nucleus	41.32	36.39
TraesCS7A01G395400.1	Wheat	cytosol	36.46	36.33
CDX76085	Canola	plastid	38.19	35.83
CDY04391	Canola	nucleus	38.54	33.95
HORVU7Hr1G093230.2	Barley	cytosol	35.42	33.66
CDY65376	Canola	nucleus	29.51	30.91

Protein Annotations

EnsemblPlants:CDY45983	EnsemblPlantsGene:GSBRNA2T00083089001	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31100
PANTHER:PTHR31100:SF43	PFAM:PF03479	PFscan:PS51742	ProteinID:CDY45983	ProteinID:CDY45983.1	SEG:seg
SUPFAM:SSF117856	UniParc:UPI0004EE9CB6	UniProt:A0A078I9Y7	MapMan:35.1	:	:

Description

BnaA02g18130DBnaA02g18130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9Y7]

Coordinates

chrLK032645:-:38619..41960

Molecular Weight (calculated)

29420.3 Da

IEP (calculated)

7.259

GRAVY (calculated)

-0.453

Length

288 amino acids

Sequence
(BLAST)

001: MDGGYDQSGG ASRYFHGLFR SELHNQLQQQ AQAQPQPHLQ LQPDDESDSN KDSGRLDSDP VTSGSTPGKR PRGRPPGSKN KPKPPVIVTR DSPNVLRSHV
101: LEVSSGADIV ESVNTYARRR GRGVSVLSGN GTVANVVLRQ PPVTIHGNNG GTGAGVGGVV TLHGKFDILS ITGTVLPPPA PPGSGGLSIF LSGGQGQVIG
201: GSVVAPLVAS GPVILMAASF SNATFERLPL KDEEEEGGGG GPPPAPTASP PSGPGQGEIR GNPSGYDQFT GDPHSLGWVA GAASRPSF

Best Arabidopsis Sequence Match ( AT1G76500.1 )
(BLAST)

001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF

Arabidopsis Description

AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.