Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015738.1-P | Field mustard | nucleus | 99.64 | 96.88 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 90.36 | 91.67 |
| CDY20404 | Canola | nucleus | 80.36 | 83.03 |
| CDY45983 | Canola | nucleus | 83.21 | 80.9 |
| CDX68095 | Canola | cytosol | 77.5 | 80.37 |
| AT1G76500.1 | Thale cress | nucleus | 85.71 | 79.47 |
| CDX85952 | Canola | cytosol | 77.14 | 79.41 |
| CDX96613 | Canola | nucleus | 76.07 | 70.76 |
| CDY33658 | Canola | nucleus | 71.79 | 68.84 |
| CDY31511 | Canola | nucleus | 65.71 | 68.4 |
| CDY01347 | Canola | nucleus | 65.36 | 67.28 |
| CDY29494 | Canola | nucleus | 65.71 | 67.15 |
| CDY31858 | Canola | nucleus | 65.36 | 67.03 |
| KRH51551 | Soybean | plastid | 43.93 | 60.29 |
| Solyc04g082810.2.1 | Tomato | cytosol, nucleus, peroxisome | 49.64 | 56.73 |
| PGSC0003DMT400025705 | Potato | plastid | 50.71 | 54.62 |
| TraesCS6D01G258400.1 | Wheat | plastid | 57.14 | 48.63 |
| TraesCS6B01G306100.1 | Wheat | plastid | 57.14 | 48.63 |
| TraesCS6A01G277700.1 | Wheat | plastid | 56.79 | 48.62 |
| Zm00001d051620_P001 | Maize | plastid | 55.0 | 48.58 |
| EES05630 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 56.79 | 48.48 |
| HORVU6Hr1G070090.1 | Barley | plastid | 57.14 | 48.34 |
| Zm00001d017825_P001 | Maize | plastid | 55.71 | 48.15 |
| Os02t0713700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 57.14 | 47.62 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 47.5 | 47.33 |
| KXG19929 | Sorghum | nucleus | 52.14 | 45.91 |
| CDX90445 | Canola | plastid | 44.64 | 45.62 |
| Zm00001d045928_P001 | Maize | nucleus | 49.64 | 45.42 |
| CDX75499 | Canola | cytosol, nucleus, peroxisome | 48.57 | 45.03 |
| CDX69136 | Canola | cytosol, nucleus, peroxisome | 48.21 | 44.7 |
| VIT_18s0122g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 50.0 | 44.3 |
| CDY53650 | Canola | plastid | 40.71 | 43.85 |
| CDX79838 | Canola | plastid | 40.71 | 43.85 |
| CDY54780 | Canola | cytosol | 44.29 | 42.47 |
| TraesCS7B01G193900.1 | Wheat | cytosol, nucleus, peroxisome | 48.21 | 41.93 |
| Os06t0326900-01 | Rice | nucleus | 48.21 | 41.93 |
| CDX78802 | Canola | cytosol | 43.57 | 41.92 |
| TraesCS7A01G225700.1 | Wheat | nucleus | 48.21 | 41.8 |
| HORVU7Hr1G046930.1 | Barley | cytosol, nucleus, peroxisome | 47.14 | 41.77 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 40.71 | 41.76 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 41.43 | 41.58 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 41.79 | 41.49 |
| CDY72485 | Canola | nucleus | 40.36 | 41.39 |
| TraesCS7D01G228800.1 | Wheat | nucleus | 46.79 | 41.2 |
| CDY70947 | Canola | plastid | 38.21 | 41.0 |
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 41.79 | 40.91 |
| CDY60321 | Canola | plastid | 43.21 | 40.88 |
| CDY18931 | Canola | nucleus | 45.0 | 40.78 |
| CDX74739 | Canola | nucleus | 45.0 | 40.65 |
| CDY14862 | Canola | plastid | 37.86 | 40.61 |
| CDY41211 | Canola | plastid | 42.5 | 40.34 |
| CDY53687 | Canola | nucleus | 42.86 | 40.27 |
| CDY68242 | Canola | plastid | 42.5 | 40.07 |
| CDY64701 | Canola | nucleus | 44.29 | 39.87 |
| CDY37040 | Canola | nucleus | 43.57 | 39.61 |
| CDY49327 | Canola | cytosol, endoplasmic reticulum, nucleus | 44.29 | 39.49 |
| Zm00001d046696_P001 | Maize | cytosol, nucleus, peroxisome | 38.21 | 39.48 |
| CDY27387 | Canola | nucleus | 43.57 | 39.1 |
| EER88668 | Sorghum | cytosol | 37.14 | 38.52 |
| CDY02949 | Canola | plastid | 41.79 | 38.11 |
| CDX84222 | Canola | cytosol | 26.07 | 38.02 |
| CDY45266 | Canola | plastid | 27.5 | 37.56 |
| CDY21124 | Canola | cytosol, endoplasmic reticulum, peroxisome | 38.57 | 37.5 |
| CDX76085 | Canola | plastid | 41.07 | 37.46 |
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 38.21 | 37.02 |
| CDX98771 | Canola | nucleus | 41.79 | 36.91 |
| CDY41289 | Canola | nucleus | 41.07 | 36.51 |
| CDX82978 | Canola | cytosol, nucleus, plastid | 41.07 | 36.51 |
| TraesCS7B01G297300.1 | Wheat | cytosol | 37.86 | 36.3 |
| CDX94128 | Canola | nucleus | 42.14 | 36.09 |
| CDY31677 | Canola | cytosol | 25.36 | 36.04 |
| TraesCS7A01G395400.1 | Wheat | cytosol | 37.14 | 35.99 |
| CDY21451 | Canola | cytosol | 31.43 | 35.92 |
| CDX83182 | Canola | cytosol | 31.07 | 35.51 |
| CDY04391 | Canola | nucleus | 39.29 | 33.64 |
| HORVU7Hr1G093230.2 | Barley | cytosol | 36.07 | 33.33 |
| CDY65376 | Canola | nucleus | 27.86 | 28.36 |
Protein Annotations
| EnsemblPlants:CDX87591 | EnsemblPlantsGene:GSBRNA2T00146596001 | Gene3D:3.30.1330.80 | InterPro:AT-hook_nuclear | InterPro:IPR005175 | InterPro:PPC_dom |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF43 | PFAM:PF03479 | PFscan:PS51742 | PIRSF:PIRSF016021 | ProteinID:CDX87591 |
| ProteinID:CDX87591.1 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI0004EEDAF4 | MapMan:35.1 | : |
Description
BnaA07g32820D
Coordinates
chrLK031850:-:1371107..1371973
Molecular Weight (calculated)
28803.5 Da
IEP (calculated)
7.098
GRAVY (calculated)
-0.497
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGYDESGG ASRYFHNLFR PELHHQLQPQ PHLQTHLQPQ PHSDDESDSN KDPGPPDSDP VTSGSSQGKR SRGRPPGSKN KPKPPVIVTR DSPNVLRSHV
101: LEISSGADIV ESVNTYARRR GRGVSVLSGN GAVSNVVLRQ PATTHRSNGV VTLHGRFDIL SMTGTVLPPP APPGAGGLSI FVAGAQGQVI GGSVVAPLVA
201: SGPVILMAAS FSNATFERLP LEDEGGEGGG GGGPQPPTSA SPPSGAGQGD LRGNMSGYDQ FSGDPHLLGW GAGAASRPSF
101: LEISSGADIV ESVNTYARRR GRGVSVLSGN GAVSNVVLRQ PATTHRSNGV VTLHGRFDIL SMTGTVLPPP APPGAGGLSI FVAGAQGQVI GGSVVAPLVA
201: SGPVILMAAS FSNATFERLP LEDEGGEGGG GGGPQPPTSA SPPSGAGQGD LRGNMSGYDQ FSGDPHLLGW GAGAASRPSF
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.