Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G306100.1 | Wheat | plastid | 97.89 | 98.48 |
| TraesCS6D01G258400.1 | Wheat | plastid | 97.58 | 98.18 |
| TraesCS6A01G277700.1 | Wheat | plastid | 96.98 | 98.17 |
| EES05630 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 88.52 | 89.33 |
| Zm00001d017825_P001 | Maize | plastid | 86.71 | 88.58 |
| Os02t0713700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 89.73 | 88.39 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 58.61 | 69.04 |
| HORVU7Hr1G046930.1 | Barley | cytosol, nucleus, peroxisome | 62.24 | 65.19 |
| Solyc04g082810.2.1 | Tomato | cytosol, nucleus, peroxisome | 45.02 | 60.82 |
| PGSC0003DMT400025705 | Potato | plastid | 46.83 | 59.62 |
| KRH51551 | Soybean | plastid | 35.65 | 57.84 |
| CDX87591 | Canola | nucleus | 48.34 | 57.14 |
| CDY20404 | Canola | nucleus | 45.92 | 56.09 |
| Bra015738.1-P | Field mustard | nucleus | 48.04 | 55.21 |
| CDX96613 | Canola | nucleus | 50.15 | 55.15 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 45.62 | 54.71 |
| CDY45983 | Canola | nucleus | 47.43 | 54.51 |
| Bra008262.1-P | Field mustard | nucleus | 46.83 | 54.01 |
| CDY31511 | Canola | nucleus | 43.81 | 53.9 |
| AT1G20900.1 | Thale cress | nucleus | 50.15 | 53.38 |
| Bra016444.1-P | Field mustard | nucleus | 50.45 | 53.02 |
| CDY01347 | Canola | nucleus | 43.5 | 52.94 |
| Bra012256.1-P | Field mustard | nucleus | 49.24 | 52.75 |
| CDY31858 | Canola | nucleus | 42.9 | 52.01 |
| CDY29494 | Canola | nucleus | 42.9 | 51.82 |
| CDY33658 | Canola | nucleus | 45.62 | 51.71 |
| AT1G76500.1 | Thale cress | nucleus | 47.13 | 51.66 |
| Bra003717.1-P | Field mustard | nucleus | 44.11 | 50.87 |
| CDX68095 | Canola | cytosol | 41.39 | 50.74 |
| Bra025854.1-P | Field mustard | nucleus | 43.81 | 50.7 |
| CDX85952 | Canola | cytosol | 40.48 | 49.26 |
| HORVU7Hr1G070490.2 | Barley | cytosol, mitochondrion, peroxisome | 41.39 | 47.57 |
| HORVU4Hr1G060280.1 | Barley | cytosol, nucleus, plastid | 36.25 | 46.88 |
| VIT_18s0122g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 44.71 | 46.84 |
| HORVU6Hr1G037640.1 | Barley | nucleus | 43.5 | 46.6 |
| HORVU6Hr1G037630.1 | Barley | nucleus | 43.5 | 46.6 |
| HORVU7Hr1G020390.1 | Barley | mitochondrion | 26.59 | 46.56 |
| HORVU6Hr1G010470.2 | Barley | cytosol, nucleus, peroxisome | 39.27 | 46.26 |
| HORVU6Hr1G091740.1 | Barley | cytosol | 40.79 | 46.23 |
| HORVU4Hr1G000870.2 | Barley | nucleus | 39.27 | 45.3 |
| HORVU4Hr1G015750.1 | Barley | mitochondrion | 37.76 | 44.96 |
| HORVU1Hr1G008650.1 | Barley | mitochondrion, nucleus, peroxisome | 43.2 | 44.41 |
| HORVU7Hr1G017700.2 | Barley | nucleus | 43.2 | 40.97 |
| HORVU7Hr1G093230.2 | Barley | cytosol | 36.86 | 40.26 |
| HORVU3Hr1G033710.2 | Barley | plastid | 24.47 | 38.03 |
| HORVU0Hr1G011700.1 | Barley | cytosol | 22.05 | 33.8 |
| HORVU3Hr1G108820.1 | Barley | mitochondrion | 22.36 | 28.91 |
Protein Annotations
| EMBL:AK363759 | EnsemblPlants:HORVU6Hr1G070090.1 | EnsemblPlantsGene:HORVU6Hr1G070090 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF5 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 |
| UniParc:UPI0002006580 | UniProt:F2DIP1 | MapMan:35.1 | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DIP1]
Coordinates
chrchr6H:+:487059509..487062726
Molecular Weight (calculated)
32431.0 Da
IEP (calculated)
7.145
GRAVY (calculated)
-0.258
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGMDPGGGS PGAGSSRYFH HLLRPQQQQQ QPSPLSPNSH VKMEHSKMSS PDKNPVGDQD AGGSGSGAGA DQPSSSAMVP VDGGSGGGGS GGSGGPTRRP
101: RGRPAGSKNK PKPPIIVTRD SPNALHSHVL EVSAGADIVD CVAEYARRRG RGVCVLSGGG AVVNVALRQP GASPPGSVVA TLRGRFEILS LTGTVLPPPA
201: PPGASGLTVF LSGGQGQVIG GSVVGTLVAA GPVVLMAASF SNAVYERLPL EGEEEEVAAA AAGAEAQDQV AQSGGPPGQQ PAASQSSGVT GGDAGGMSLY
301: NLAGGNVGNY QLPGDTFGAW GGGGGGVRPP F
101: RGRPAGSKNK PKPPIIVTRD SPNALHSHVL EVSAGADIVD CVAEYARRRG RGVCVLSGGG AVVNVALRQP GASPPGSVVA TLRGRFEILS LTGTVLPPPA
201: PPGASGLTVF LSGGQGQVIG GSVVGTLVAA GPVVLMAASF SNAVYERLPL EGEEEEVAAA AAGAEAQDQV AQSGGPPGQQ PAASQSSGVT GGDAGGMSLY
301: NLAGGNVGNY QLPGDTFGAW GGGGGGVRPP F
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.